Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs1077 ]


Position: chr2:59,202,276-59,203,399 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LINC01122(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGGGAAAGTGGGAGAGAAAACAatcttcatcaaagctttttgctatttggatttccttcg
gctgcctattatccatcagaatattagaatccatacataatggagttccttggctcctac
gcagtgatgtccttacgcatgcaaaaggaagttgtatcttgcaaattcctccaaaaaggt
tatcaaaattgccctgaagggttgacacagtcctgacagggattgttttgaaggatgatg
ttattatttttcattggtcattccacaaaagtattagtagaaaagaaaaattcaacacct
gtccctcggatcttatttagcaaaaaaaaaatacaacaagatttcactttaacagggtct
ttcaggcagaaaaatacagcagtaacatgtgtaaagaaaatttcaatatgttttgacaat
agtgtaatctagaggaagtgttatcccccttgtggaggtcatcattcttaatacagtgtg
tgtcatcaattctcaggacaacagagaaaatgatctagtcaatacatatgaaacagaaat
catgcataaacatgctgccttactataaagtgggtgacaccactgaaaattggatagcag
gcctggatgcaattttccgtaactttttattattcataagatcgtgtgatctaataagcc
acacctcaaattactgtccattgaaggtgttcttgagtgatagattttgacaaaccagac
agaggatatattatgattaagatcagatgctggtagtgctggactttctgctgctgctga
ctgttttcagctgtcttccatcaattctgtatttttcccccttaaaaaagtgaagaagca
tgaatccgtgggctatgaaagcataagagaagaaatctactaactgattattcagtagct
ctgattccaagtgtctctcaatttaactttgattttaggtgggggaggattgatttgaga
aagaacaatgaggaggagggacataatatctgagttgaaggagacaaatatccgaatctc
ccatttaagtatttgttagaaatacatggaactttaaagtggcaggctctttcttaaata
tttaaatggtcagggggaggaaAAAAAGGTAACACTGCCACCAG
Primer
(+)AGGGAAAGTGGGAGAGAAAACA
(+)CTGGTGGCAGTGTTACCTTTTT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.