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Human element [ hs1075 ]


Position: chr14:28,398,563-28,400,621 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LINC00645 - FOXG1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GGTCCTGTACAAGATTTCATTCAAgtttggagaatatgaagacaagaaagaaaatatgtg
aaaggaaaggaaaatataaattatgctgtgtttgctgtctatttagaacagctcatttaa
aattttttataggaagttacaaatatgtaagtgagaaagatatcacatttatctgtctaa
gatctatttatgtaatatataaaagaacttaaacaactagaaaatagttttaatattatt
ttcatgtgccaaaatataaaatcatatatccaccaaaatgtctaaaaattttcattatga
aaacattgtatacacctctatgagactctgtgtgtgtctatgagtgagagagcaacagac
tgcatgaggctgcatgattcattgaagaagagaaaagtgtggaagaatataaagcacacc
tggacctgaatctcatggagttacatagaatgagttttcagcctctcatcatgaaaattc
acaaagggtgatggtgggtctgatctcatatatatgaatctctaaaccactgttccacaa
agacacagaaaaggatcaaccaaagaacagcagaggagccatgctggcattcaatgaatg
cactaactgcttttttacagtgttcttcaatgtgttacttctttcatgctgagacctgca
taaaaatgaaatgtcatacttcactacccttccagccagtggtacagtttattttcttgt
cttctgatagagttcacaaatttaataactgccttttatcctggtctctatattcccttt
cagcttcctattcagtcttctctgtctctgcaggcttgcaggaaatgcctcattttaggt
tttctataaaggacataatagacaagaaaagcaaaagcgaagaggttatcatctatcatt
tagaaatggacaaggggcaatcagaccattttaatggaggcagagtggaaaaaaaaaaga
aaaaaaaaactctttgcttttgtgatatttaccgtgttctttcggttgagacaatttgtg
ccagaataaattgagtagtttatgttgaaaagtgtattatggttcttttaatcagtggcc
actttggaaaaaaaaaatttatacttaataaaaaaataataatgaggttattttcaggga
aatggtgataaaatgggactgattttttttagctaattaacaaatacagtgatgaatttg
agtttttctgctttgatgcatgtgtctataattaataatgactttggagggctccacatg
tttcctaaatgacaatgacaatatcattaatgagatacattattgtacaggatttttgga
agttggaaaataatagagaaaggttcaggcaatatttctaaagaaatatcatctgctggt
ggaaccaataatccttcatttacattctcattaaggattgaataggcaacgcatcacatt
cttctgagttgcttttaaacatgcaggcaagcacattactagcaaatcgcaagagtgagt
ttgtaactagacatctttgttcctgtcccatgctctatatctttcacctctttgattaaa
aacacagcatgtgagaatgaatcattgttaatctcagagaaaatggtttctaacattgaa
ttatttaaatgctaattgcagtgctttgcctacaaataatcaacctcaaccggaactttt
aactagatgatgtttaattctctttcaaaataccaagtggctttcaatgcttcgatagtt
cttgcatcccaataagtaaatatcaaaggatgtactttagaagaagcatgagatcgaaaa
atgctgaaattaattttctatcacattctattcttactctagagcattggcttgcaggat
cacacttatcctatgtacttctaaaaattccagtactagatacatttggcatgatactac
tctaattataatcagaatttcatctgaattcgtttcatgccaatttttttttcttacaac
actaaagacatagttagctttgtgagaaaattgtgagctgacgtgtagttaaatCATTCT
CTCAGTGAACATTTTCAGA
Primer
(+)GGTCCTGTACAAGATTTCATTCAA
(+)TCTGAAAATGTTCACTGAGAGAATG


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