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Mouse element [ mm1062 ]


Position: chr6:91,565,044-91,568,515 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Lsm3 - Slc6a6

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ggatTGGCTCAGCAAGGAAAAAGTcctcaccaagagtgtggacagacagacttctctttt
aaggttggctctcggccatggaggaaagtcaatttcagaattacccttaaacctttgaat
ctgaacatttggatttgacaatgcctgtgtcaggtttgaatacctaaggcaacagagagg
cctggactttgctcccctcggtaagcctgccaggactatgagtctgtgctggtccaaggc
tggggtaaatgaacattttcccctagctaaaaaacaggggataaaggtgcctcctgtaac
tcctagcaggttgggagcaggaagtagggtggtttagacagcaggaatcctgctccacaa
aggccagggagaagctattgtttcagggtttaactgggggcccccttctgttggcagcct
cctccctgtgtctcaaatggagccaaggccttaatccagataaacaaggtaaaaccagaa
ccagccctgagacactcccttccagccaggcattcccctgctcctgtaccatcatccgtg
cgtgactccccagtgcccactctgcctctgcttgaagctccagactaaccactatctgat
gggctttccagggtgctgcctgagacttcccaatatgctgatttacccaacacaagctgg
aatgtactaaccaaggcgctgggtgctgtgtaaaaggtatcctgcttcaagggagagtgc
atcaacacaacataaaatggggatatgggcagctgaacaggcttgcccagtgccacacag
ccagagcatattcaaggctggcaccctgctgagcaccagtatgggcagtgctggtcttgg
aagaggacaaagaagggacatgagggagcgttgtaacacaagtgagatgtgatgaggtgt
ggcccctccttgtagagcttcataagacagttaaccaaagcacaatccaagttcttcctg
gggaaagtaatgaatgtattggactttcttatagaatgtgggtgaggggtgacttacaag
gatatgggagaccccaaatagtcacactgaaaaacctcacccagcatggatgatgacttc
tttatagatggagtctacttcagctaaccgcccacagcctttctgctccagcacctctgg
atacccagaggccacagtcgtggcaacactacacaccaacggctgtggggggagcagctg
gaatctaatgtgaagtttgatgacccacaaaccccttctctgagggaacactgacagtcc
atagacccatcatgaaggagttctgcactcggatgccgctggtcagatgaagatggcagc
cgttctgcccaggctctataacaaggacatgaagcatgggaagggcattgcaggccatat
acttctgcctctggacctcagttttccccgggtcatgcacataggggcttagtgtacact
aaagagggggtgctttgtagttctcagagattgctccagacagacgtggagtgtgaacaa
tgggtgcctctgaatttgtgcccagctgatcttcccactgcacaccccacacaggctgct
ggctgtgatgcccctgcttcagatccgggaccactaagctgaggatcaggagcgctgggc
aagctcttctacagccggctgcctgggcagcagccaggcggttactcaggccaccgagtc
cccattgctgctgcctcactggttccagctgtatcccatgcttcatcctggcattgagat
tcacaatgacagtttctgggcattactagaatgtacgtaggaaggcaaggcaggaaaacc
cctgcaagcttgaagacagcctggagaccctgtttcgaaatgaaaacaagcaaagaaatg
ggacactaacctgaatttgagtctctttaaaaaaaccccaaattcgaccctgtgcctcag
tcacatccttctttcaaagggcacccagggccagattactttaaattgggtgctgactaa
gctgaaaagcagggagacttctcaggaagcgagcatgtctccagcgggaggtgagtagct
gccagcacacacaggattggtctggctggaaagggcactgtccgacaagctgatgacccc
agggaatccttgaggtaagggtcatcggactaaagccgaggagggatgctacaatgagat
ctggatcttggatatcgtctctccagctgctccctgaagagcctcggcaggaccaggcta
tcagccggaaaacaaaagcaagccgcatgtgggtctgcgattgtgagagacaaagccttg
tgtgaacctagttcccgtgcctgctggctgtggaactacatttcccagactcctctgcag
tggggcagggctatgcgatttagtctgacctatagaatgtgaacagaagtgatgaaaggc
acttcctgaccaggccattaaaagcctgccctacaatgcacaagtttatttcagtgcccg
agaggcctcctggttgagctgagaggagccagggttgctggctgactgtgtgaaacagtg
gctgccagcattcattgggtctgtgttaagccctgagatctggggtttcagtatagcagt
caacctgcctgcctggctgacacaagtggatgtttctgagataggtgtccgggatagagg
tcccggatgatgagagccaggtgtagatgaagacattgcccacgtttctggccggcagag
gcgactttactgacagggtgaccatcgtgggctcttgagcttgaattgggtgtttgtgac
actagagagggcgtcaggaggcccttagctaggcttgggcaatctcgggcggccctgcgg
catttctgggaactatcagttgcagtggtgagggccacctgtctctgtggggagaaaaca
aagaccatctgtctgtggtgctgtctatcaccctacccttgcccagttctgctccagagg
cctgggatgtctggcctgagacatggaagaagcgggccagtgttgggcctgagggattct
gggattttgatgttgtttctgtttttgtttatcttcccccccccccaacatttcctgaga
tgacaataacattaaatgactatcttaatggaaatggcctggtatgctcttggccatcca
aacactcctgcaatgtagatttggagctggtgagcagtcactgtgtgggcaagcccagtc
ggatggctccgtggaaccatatacagtgactggcgtctagaagataacatggagctgagc
tgcctgtggggccagatcattttgggttttgcttccctggttttgtttcctcaatgcaca
tgtttttaaaatgaacaaaaacaaaaggatgggggcccagtgcatggcttagatggtaaa
gggcttgccactaaaccttacaacctgagtttaagccccaaggtccacagtggaaggaga
gaactgacatggcatacatgtgcgcattcataCACACCCACAAAATGCTTTG
Primer
(+)CACCTGGCTCAGCAAGGAAAAAGT
(+)CAAAGCATTTTGTGGGTGTG


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