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Human element [ hs1055 ]


Position: chr1:88,402,821-88,404,888 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC100505768 - LOC101927891

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GATTGAGGAAAACGGCTCTTCTtttttctccttcatcaaatgcttttttcacctgcagag
gtctctctctggctctctgctcattctgccagcatatctcctagggccatcttccttcat
tcattccaacaagatcttcatctgtgccaaactccactgagacatgtggaagcattttgg
aaacagggtttctcttggggtctaagtgcagatcaccacaatatgaaacaaaacatttga
ctaccaaactgatttacagcaaacaaactatgaattgcaaagtctcatgatctttaatca
catcaccacttaggcctgataccattaacacattgctgtgaactatggcaaaccttatgc
ccaaactgtaatgatggttccagaaagaattatccttttgcttgttacacttatattgga
tatcagattgtaaaaatgtctgagagtcacccacactgttctggagggcacaaattagaa
cggggcagggggaagtgcagtgaggaaggagaaaaacacaaccatccaatatgattttct
cagcaaaagagacaatatttccaatgtctagatgcctatttaattattccacttaagttc
attcttagaggggtcttgtcaataaagtcaacccaggctcttggtgtgtaacagcgtttt
tgagggtcttgagagcttcattaaaagcagacagtttctctaaccttttagcagaacctg
ttatctgatgacgtgaattaaagtctctcaaatgactaataatcatatcagggctgccat
gtcagcttgtagatttgaataagagggtctgaaaacatttgcatgcctcaatgtgccagt
gctaagaagctaatgtgatagtgctgtcataaagcactggaaagacatgacttaatgtaa
tctgtcatgtcatatgctaatcttcaaccattacttgagtgctgtaagtaagtagaaagc
atttgggagaaatcctttccaatttctctgagtaccacttctgctgctggtcagctcaaa
tgggttttgtgcatttaatgcagagctcaagtcaagttggtttaggtcacacttaattaa
ccagcacacgaatgggctgggccatgagagctctatggaaaatggttatttcagaggcgg
tctaacaagtaaatatttcatatgctgaaggaaatgggaagaggatactttcttattcct
tgataaagaatatgttcttttcagagaaaacactatgaatcttaacaagacatcattttg
gtctctgctttcctccttctatatttgagttgagtttatagaaagcagataataaatagt
taaaaacatcactctcactttgataccaagcactctattcagcagatgtggacttatcac
tcaaataatagagactgctttgactctaggtccatagaaacagaggacaagtaatcaaag
ggagatatccacttggcatgctctttaacaagatgacagtgtctcttaatagacagtcat
taagacaggagactggtgtcagggctaagtacagtttgtgaaatagacagtaactgagac
tagagagactgacaaatttttgtccaatttttcaggaaagtgtgcaagggattgtgattc
aaaatatgaagtttatttttatcagccacactgagtcaagtcaaaaagatgcttaagaac
ttgaagaactgccttctggaataggatttttgaggatgctgagcagatggcatgagattg
gccccaaagatactgcctgaatttcccagcattcgtacaaggcccgctattggtaaccca
agggaactttcatgcatgtgggaactggctttttataggtctaattagaaagcacaggca
attcccacctacaacattaaaaaatgcttctgtgaaagcatttttttcttgaaaaatgtg
tgtaaaatttacagaaaaaattattatgaatcaaaattgataaagatgtggtcatatttt
cctaacagttaagattgtgctaacttaggggctatttcacagaaaaagaataaaaacctt
attaCAGAAGTGGTGTGTATGCACTACT
Primer
(+)GATTGAGGAAAACGGCTCTTCT
(+)AGTAGTGCATACACACCACTTCTG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.