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Human element [ hs1047 ]


Position: chr18:76,009,581-76,010,891 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LINC01029 - SALL3

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CGGCTGAGGACACAGAATTAAAggagtggcacttccactcagacactgattaccaccaat
tttatttgtaaatctcttccaaataatgatttaaaatccattcttaagcagccatttaaa
agcaccttgagaatacattctaatggcttaatgtgctgcataattgaagctttcttgtat
gaaatcttgaaaaattattgactacagaaatcgtgcctgtcatgagagaacggagtcttg
catgatctatgaatttgagcttaaaatttttgtgtgcaaaaccagttctactttttgtga
gctagtgttatatttatatagctatttcaaagtattcataggtatattttaaattttttt
ccactcctgaaatttggtgagcatctgctgaaacccattacaggcaatcgctaatcctga
gtagcgacgcggtgatgtactgtcttcttagtggaggtgctccccacgcatgcaaaattc
ttccagaattaaaaaatctgctccactaattgtggaacaaattttccacaaccctctttg
agaatccagctctaagtattctcccatctattaaacagatggcagataagattgtaaaca
tatttgcttcatattggatagatagtttctggcatgatactaattaacaaattaaatgac
tgactttctgcatcacgttagagttgaaaccacgtggtaagtttgtcttgggtagttatt
tactttgacaatagcatgcagtgaaacacttaaatgttttcccaggaacattatgcattg
agcagttttcttttttaaaactccatattttattataattcatttgactttcattacagt
cactcattacaaaatgtatgtgcatttaatccatctccgagggctgcatattttcacatc
ccattcgcgatcattgtgattatgtcttcggtctaggcaaggatgcgtggaacaaggcat
tgcctattctcgctcctcatattttaggtgggactatgcaggaaagagacttctaatgta
ctgtagtggcagcgaagctgttgaggaatgcttctgtttaattcatttggaaagatagcg
tcttgctgttctgcagctttgtggatgcgagtgaaatcagtccaagccgattagacaagg
ctgctgcttgttattcagaaacacctgaaaaggttgagctaattgctgttcattctgggc
cccagtgagctcatctacaaaatgggagcaaaaatttaccccctcttgtcatgggaagca
tcttgattgtcaaatttaaaaatgcatagGAGAGGACTTTGGGAAGTGGAT
Primer
(+)CGGCTGAGGACACAGAATTAAA
(+)ATCCACTTCCCAAAGTCCTCTC


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