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Human element [ hs1045 ]


Position: chr1:38,819,171-38,820,577 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC339442 - RRAGC

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGTGGGTCTATGAACCCCAAACacaccacaaggcaacatgtcatcccttcagtccttggc
cctcattgatcttgttttctggttatttatccaaaaagttcagacaatcatgtgacctgg
tggtgccatgatgaaccaaatgccgcctcatcttagttgggagaggctcctgtctgctgt
tttttgagaaatgtaattgtctagaagatccagagcgtttcttctgagtagctctgccac
tcagacccacatacgttatgtgggggcttatacatggaggccctgggagggaggcatggc
ccgactccactccagatgctcacagtccccctggtcgtgccctctattagagcacccctt
ggcctttctcctggaattggaaaggatcaggatgaaggctgaagcttagatttttgagca
gaggtaatttcagaaggtggaatcatagcttaagaaactctctggggatttttcctgatg
caaagctaacaagacattgtgataatttctctggagctggcctcattccaagttggattt
taaacgcagattataaagcaaacaccatcccccacaagtattaaaggaggggaaaataac
agaacgggggctgcaaaaatggtctctattgtgggaccaaaagccgtcaatcatgtaggc
tgacaggcgtcagagattgacagacaggccctcgctcctgacttcagttatcaaggggaa
tgggaaaagtgtctgcaagaacatgttaaattgccaaagtcattaccagtcaccaattac
caaagaaaagataacaaggtgtattttagaaaaatcgatgcaacaacatgcatttcaata
cagtgaattttttagaactttcaaaaacgaaacgaactatttagggaatacacaatggtt
ttcagtgaataccaaacactgggctttgtaaagtcatcaatattcactttagatttggct
ctgctttaggggagcagagatcaagcagtaaactaatatacttcattttttccccctgca
gttccacccaaaggacaaaatgataactggaggaccagctggttttcctgtaaacttctt
caaagaaagacccagctggtcactgagggcaccttctggggccctgggcatggacagggc
acaggtcaagtaggtgatggtgtgatgatgagaggggtgcatttgtcccaggaggtcctt
ccacacgacccagcacaacttcctaatcatctcctctgcgccctcccctgggctggcccc
tggggatggagacattgaaggacacagtgcctgccctattgggccctgaagtctggggtg
gcaaaaggaggcgcatgaagccaacagattataggacaatgcagactcataatagttacc
aacaaGAATGAATGATGTGCAACAGGA
Primer
(+)AGTGGGTCTATGAACCCCAAAC
(+)TCCTGTTGCACATCATTCATTC


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