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Mouse element [ mm1043 ]


Position: chr1:75,663,304-75,666,673 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Slc4a3 - Gm17751

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ATAAATGCCTTTGCCACTCGaggttgggaactatgtgtttcagagctgaagactcatact
tgctgagctgggtatcaagtcctggttcttgttccctcaaattttggtttgtctcagagc
acaagaccctgtaatgatctcaggggcagaaaagaaaaatgcttaattttcttttcttct
ttttttaaaaatattttttattatgtattttcctcaattacatttccaatgctatcccaa
aagtcccccgtaccctcccccctcacttccctacccacccattcccattttttttggccc
tggtgttcccctgtactggggcatataaagtttgtgtgtccaatgggcctctctttccag
tgatggctgactaggccatcttttgatacatatgcagctagagtcaagagctcctgggta
ctggttagttcataatgttgttccacctatagggttgcagatccctttagctccttgggt
attttctctagctcctctattgggggccctgtgatccatccaatagctgactgtgagcat
ccacttctgtgtttgctaggccccggcatagtctcacaagagacagctatatctgggtcc
tttcagcaaaatcttgctagtgtatgcaatggtgtcagcgtttggaggctgattatgggg
tggatccctggatatggcagtctctagatggtccatcctttcgtcacaagaaaaatgctt
aattttcttaaccttctgtccgtatctttgggtcttcagctcaaaggaagaatgcgttag
aacaaagctggtgtgttccatgcccttcattcatcataatttcattcgctgtgaaacatt
gaatataaataaagggtttctctcggtggcatcccatgttgatgagcaggtacagccttc
tcactgtttatggcctgcatgcttcggtgctaacgtgctccccatgaatgtggttgggtt
tggctttccaggcaacagttaaaccagcaggagaccacttgtgtgcaatttgttggaatg
gaatctgcattttgggattagattacttagtagtgtcattttgcattgagtcaactttgt
gggtggtctccaataaaccccagctcgtacagggagtgtcagccctgattatctccaagc
aagcttgtaatgactgcacagcttggtgtttacaagaaaaagccagcttcccttacttta
attcagggtatgcagaggcgtggatgaaccccccacagaaggagtggcaaaaggcccatt
ctcagggccattctgagagctgtgtaactcagctttttgtcttccccggggatcagggca
atagttaacaactatcacttggggctcaccaattagggcatttgtctttaacaatgcctg
aaggagctgttgcagctcagaataataaggactaagggattagctgaggaggacagaccc
agactgtgcagtgagctatatggctggcttacgtgtgggggcatgcagcgaataccaagc
cacaatgtgggatcgcagctgagccagtctcctcctcagccagcggtgagctggccccac
attctgtctttggtaatgtctagagacagttttggttgtcacacttagggacggctacaa
cacctaatgggtaaagggcagggctgcttgtggccatgtgcagtgtgtggtctacctccc
atctcttagaatggggagtaaaacatcagttgggatagagagaccccggttcagggtact
ggggagccttgaaaccactctccagcttctaacatctctggtccactctcattctttcta
tacccctgattggctgggggggggggtccacaaaatactacagtattcatggccccaaaa
tactacagtctcacaatagaaatggcagtgttcagttgaagcttgtcagatgtgcattaa
atcccagcctcgggcctttttagggggtgacattgagataattattattttttttgaggc
agagcctcattctgttgtccaaagctgccctagaatccactacgtagctcaggcttgcct
taaaaatcacatcacagcaatcagattgcattagcatcctaagagctaggattatcgatg
gaagcaaggccaagtgtctggctggagcaagtcacttaggccagatcagcttcagtcaaa
ccatttcccattaaattttaatttctttatcgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgactgtgcatgcacatgtttgtatgtgcatatgtgggtgtgatgt
ctaggtacttgtgcaagtagaggccagatattgggtcaattctgcttttaataacacttt
tctcaaggattacctagactggtgagggatccccagaaattctatctctctcttgcacac
ttaccttaagggggtgtggcgggggtgggggctacaggtatgcccagctttttatatata
tgtgtgagggtctgaagtcagatcctcttccttccttccttccttctttccttccttcct
tccttccttccttcccttctttcctccctctttctttccctatttttcatagaacactaa
gtaaaaagaaaagcaaaaaaacaaaacaaaacaaaacaaaaagcaaaaaaaaaaaaaaaa
aaaccaaaaaacaaaacaaaaaaaccccaaatgaaaccaaaccaaataaaaaaacgaaac
gaaactaaaactaaccaaacctgaatcacccatgtctttattctctggaaactaatagct
aacccccccaccccccaccccccaccccccaccccacatttccagctcctcccctccctt
cctctcccctcccttcctctgcccacgtgcacattgctcagtgccagcttgttagacctt
gtgatgtatttggaacatcccttcatgtcaataaatatagatccaccttgcctacatcgt
cactctccgaagctgcccactggtttacagcctcaccgaagcggaatgtagccctcccat
tccttacagtcttgagcatgtggggcatcagggctagtgcaggttgcatggagcttgtgg
aaagtgagccctttctgtgtccatctggcattgtatgaacgcacccatatggttgatcca
tggggtgagttttcttctagaaccatgttctttgtacccaccctcaggaacttcctgctc
ccggtgtggggtccatggtagagtcagtcttcatttttcatggcgccgctcaatatataa
cagcttttcactcgctctgcagtgccatacagactggtgattccttacccaagcctcggc
ttctggatctctgagagggcaactctgcttcattacatagctgttctcagAACAGAAGGA
GGAAGGCCAT
Primer
(+)ATAAATGCCTTTGCCACTCG
(+)ATGGCCTTCCTCCTTCTGTT


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