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Human element [ hs1038 ]


Position: chr3:147,748,015-147,749,579 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: ZIC1 - AGTR1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TCTCAGAGAAACATTTGTCATTCAgtaatagacattttacctatcctaaattatttacta
ctttgtaaaaggactctaaattctaattatatataaaatattttacacacatactggcca
aaaattccaaataaggaattgatatttagcaagaccttatactgacaaatacctcaaaga
taaaactttaaaagtagatgtaactttgcctttcgctgagcctatttttattatgaaggc
aagaactcatatgccacaactgaaagcatatctgtaatatcagaaagaagaccacctttt
tccaagaataatattagaatctgacagctgaataaaacatctctaatctttaccattgcc
tctttatctctttatctcaccagaaacctgaattaaaggttagtggcccctgaagaagat
acaagtccattgaatccactgagtgctgaacttcctcctggccctactgagcctggtagt
cttcagctggatgtgagatcttgcctcaagctatttacaccatgatcaggctagtaatta
gcaaaatgtttaatataatatagaagcaattaggaggtgataacatgcaattaagatgtg
ttttcagattaaagattttatagtgctctttttcttgaaaagataaagtgcctatctcaa
aatgtcaaactgcagtgatttaatctgaattattttcaattaatatgcatgtatgctagt
gatgtgttcaccgttgttattgacattgataaattaagctcatcccagctgaatttatcc
ttgagtcactctatatttcctgaatgtcagctcttcattcgtatttttttttctttgcct
acaagctgtgcgtgatctaactctaagtcccttgattcatccctgggattacagtgatgt
gtcagtctagaggaacaataatctgaaagggcattgttataaatagagtgttagaatata
attgtttgtcatgtcatttctcccctttaaattcccttgagtcctgttgaagtaatttag
acagctaagatgacaagagtcttgagactgcacttatagagttgtccaacacatctttag
cctattctgccttttgagaccatctcatctataaagtaggaaatgcaaacatcaaatgag
ttttgactacagtgtgggtttaatttgagagtttacacaggctactctctgtacaataaa
atcattatgtctcctaattcatctgtacttgttggaacaatggctattaaatggcattta
aaattaattagaaataatcatgaataagcacagcagctattgaagataacttagggaata
aaatatttaacgtgtggggtactttttttcgtaaacaaaatgtgtagatgaatagttaag
agtaaaatatttaatttttaactaaaagacctggggaaagctattattttatctcagctg
cacgatttggaaattaagaataatattcctaataataattatagtagtaatgtatatgct
atataatagtgataaaattagaacaagtttactatttctttCCAACCAAGATGTATAGAA
ATGCC
Primer
(+)TCTCAGAGAAACATTTGTCATTCA
(+)GGCATTTCTATACATCTTGGTTGG


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