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Human element [ hs1034 ]


Position: chr5:91,700,124-91,701,467 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: ARRDC3-AS1 - NR2F1-AS1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GGCATCATTGCTTCTTAGATCGggcatcaagaatgattaatatattcctttttggacttc
atgtatctagagtatctaatgaaagtgcttgatatatctatcattttcatacatactttg
gtgacgttctacctaaaagaagtaaaaatgggccgaggccaggactatttttcactcttc
acttagagtaattatccagggaatttcaggttgccaacaatattttctatgaagtccttt
tcctcttttcattttgaatgatttaatcttcttttttaaatagtctttcccaacctgtct
cctttccctaacctaaatggaggaagagatctttgaaaaacctttcattaaaaggatgac
tgcccaatccctgagtattctcagaacttttcatgatggagtctttgagaatgtttggcg
ccatctgtgcctcgattttcctttcttctgatttttctttttattttttttcttttttgt
ctatttttttttttttttgagctgaggtgccagccgagccagcctgtgcctctgttttct
gccaaaaatgaaaaaaaagagaaatgccatgaatactaaaataagacatttttttcagtg
tttctggtataagcactgtacatttcaactgagttttctgtaagaatctgtttttatcat
cctttacaatagaaaacccacaagaaaacttgtggtctattagcagaaaacagaggccct
ggcaagctccagagcagcacaatcctacagttgggaagctgggcaagaacccaagtttgt
ccacgcctaagaacaacactgtctgctaaaattacagttttcccttttcacaaacctcaa
agttgtgaaactttactaactttaagaaaagaacagttggccatacaaaagatacacttc
caaatccatcgagcaacttacttatacttgcaaatgaaccacttggagtgagtcttaaaa
tgtatttgttccaattattctgctaaggtagcaagcagaaagtaatcattttctatgtat
actgtgaataagagactccaaatgttggttccaaagaaagaatttgaccaatagttggta
agtgggcgtgtaagaaagggtgctatagaaatgatagccacattttaaaaagtacaaagt
gttttctcggttcttatatcttcaggatgatataatgcaatgaagttagaaaagagtcat
tttttttaagctctgatgtttcctgtttttgtgattcttatagagatgagtattggtaat
taagcattgccatgtaactcatcaattcagatacgtcaatggaggatacaggtcgatata
gGGTGACACTCCATCAACAAATTG
Primer
(+)GGCATCATTGCTTCTTAGATCG
(+)CAATTTGTTGATGGAGTGTCACC


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