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Human element [ hs1029 ]


Position: chrX:82,765,974-82,767,821 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: POU3F4 - CYLC1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CTGTCTCGGCGTTTCTGATAAgcacagctggtggaagcccacagcgacgatccagcgagc
tagcgagcgcccgggaggctgggttcctgctttttaaaatataaatatatatatattttt
aaatctctgtgtgtatgtgtctctgtgcgtgtgtgtgtgtgcgtgcgcgtgcaaacgtgt
gtgtgtagatagctgtgtgtatcgcgttactatgtacaaaaacaaaaagtacaaaaaaaa
aaaaaaacctggctaggctgtgtagagatcccaaaaatatgcagttgctgtggctttatt
gctagctagtatccacacaccaggtccacaggcgaacctcattcccaaggagcacacacg
tgtgaggccggccaagcacccaacacccagccgccgccggccagacctggctgggggcgc
tgcacgccactgctggccgcctagtccggcctttaggcgcagctgctgtagacaaagctt
caaactacctaaggaccagaaagcccggcccggttgtcgaggatgcgttagtatgagttg
ccaggcctctggtccaccacactgtgtctccctcagctgcaggtcgaagagcatgtgtta
attcaaatcccggacccttctacttttttgtcaagtctctgcattctgttggtagttagg
ttttagttctgggattttatttttttttcccccacactgagttcatgttttacaactgtt
gggagttttttgtttgtttcgattttttttctttgcagttaattgctatggttcgaacct
gagttaacccaaatatttctgccgactttataactgtacagttttgtatattaaacgttt
ttgaagttattaatttaaagaaagatcatttagtttattcatttagtaactgatgtataa
taaacgctattttcattaagagttgctttttcaactattttattcaaattgcctattgca
gttgccaacaattatttattttcaataaattctgcattgtgtttaaaaggaaattctttc
acagataagttggatgtcaaaaagaaaacaattcgctgtaatgtttgatgtgaagtttta
gtcaaggggtttatattgacgcaatattttattgttgtaaaagattaaaaaggtttaaat
aaaacatttttccaaaaaaaaagttttcttctcctggtcttattgtgtgctgtgtgaggt
ggagcgtttaaacagaggcacattccgggtgaacagcacttctgctttgcttcagcttat
aaatcattagtcattgttttgactcttgattcccttcctctgactttcggcctttcagct
cagctctgaaatacactggcgcacacggcacggcctattctggagcccacgctcacgcaa
agcacagcacaaattgtgggaacccgcatagggaaggctcgaggtgggttttattttagg
aggtgcaaccttactaatgttctccaaaaagagagtctctctctctcgctcgctcgctct
cgctttctctctctctctctgccagcagatagacctttctccaaacctgcctctcctgaa
actgagctcagatcttctataaggctgtcatttcgcctcactgcacccatccttcttctt
cctctccattctgttaggttcccttttggtacctgatccctcattcccctgaggagggat
gggaggatgataataggtaaggagaagcactctccctcttaaggctcttcctaggcccag
aaacgcaggtaaactgtttatcccaacaatgctgaactctgtccattcctatctgagtat
ggggggaaggaaaacataatacaaggaGATATTTTGGGGGTGGGAGTT
Primer
(+)CTGTCTCGGCGTTTCTGATAA
(+)AACTCCCACCCCCAAAATATC


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