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Mouse element [ mm1025 ]


Position: chr11:6,954,214-6,957,802 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Gm11981 - Adcy1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GGTGGACAGAATAGGCTGGAatgatgtagatcttgatttctgcctgtgttctacatcaca
cagtccctagaaacctcagagcctgcaaagtgaagtgtctttatttgttagtaaggtgac
tacggattgatattgctagtgccagattcagggtgggggaacccattttgaaactgtaag
attgaaactttcagccttacctgtggacattgggagaggaaaaaaaatgaggcgatgttt
taattgatcactagtggtcaatgatttaaacacccctaaaaatggaacctaggcttgtag
agtagtaaacaaaacacgcccagctgctgggatagtgctgcaccccaaaacttcacaggg
ttggaagtgatggtgctttgggcttctctagacctctgtgtatctctttcagtggctgtt
caccaatgtcctttaatgtcctttgtaatgaacgggtgacccagcaaggcgactttctgg
gggtttctgaggtatccttaagaatgacagaaccttaggccagggttctaagaacttctg
ctttgcagctgtgtctagcagaagctgggatgacctgtggacttcccgcctgcaggtgga
gtctaaggtagaggcagttgagggtctgagccctaacccgtctgttcccatgctaacctt
tggaagcagtgtcagacccgagtgacactgaaggacatccagccactgtcagctttgagt
tctgtgggaaacccttccccttcaggtgactggaagtgtcctgtgtggcgtgtgaactga
gaggaaagacagtaggctgtccccatgttctccacaaggaggaacagagattgggatagg
gtctaaaaggtggcaaactgcacaagcaggcatgggtcaagactccccaggacttgcagc
agtccagtgcaggggacttgcagcaaggggtgtttatgggaagaaaagctatagctggag
agccccagggctagtgtgctggcctgggccatccttgggacacttagggtgttctctggt
gagaaactgtaggttctgcctttagtgaaggtgtgtttgctctgacttatcacctcagag
tgcactcaaaaacagcatttcttttttccttttttaaatttaaaattgtatttattcttt
gttttcttcctccactggggcatggaccctgtcaaacacacacagtagggatgctttgat
gcaccaggaagttgctgagtatctcagagccagaaaatgacaagatccttttccgttcca
gagaagacagcgtgctggagcctgagcaggtgcgtgtggggtactacaggaagagaacag
agggcggtagctctaaggggccgggcaggagtctctgagggcctgaattcaggcagtgac
aggtctggtgtggagatgcacaggaggaagctattttggggacaggatccataggacttg
gtgacagattggctgtggggaggagagggaggagggggacgtgctgctgggtttctggcc
ggggttaggtagtacacggagagagggagaatccagagtgggcggggcctggcccgtatc
cactgtatgctgacagtattatcgtgtatgtgtgtcgggtgcaatcagaacccctgctcc
acttctggctcttgagcatggccatttaacagctagcactccaacggtggctagtgggga
tggctctgggctcaggtccaaggctgcagggtggctctgcaggagcccctggccctgtct
gtaaactaaggcctgctcaggaccttccagacagcggctgtgtttagggagcccactgag
accccctgctcttaaaggagaagcaaaatttatttttaaatctttctggagttttgggtt
tccttttagtcccaaatggccttttaagcttctggctcctatatttaacctatttaatga
gatttcttttccagtaattcctgaaactggtaatctctaattgggtcaaattctctaccc
acaagccagtgatgctatttttagcacaaatcctcaggcggaagctccttgggcctttca
agcgcagctgtcagcgcccgactttcaccacactcctctctccggaccgagccagacctg
attttcgatattttccctgttcactccagcgcaagcctgcccacccagccctccagcctc
ctccccatctgcagctccaggatggtttacacaaatccatttagcgctcatcagcttagg
tctccagtgtcactataaataatcgggtcctggcggctttggggaagcacctgagctctg
gtgaataggaaccacctggggacaggcagacaggtgggcaggggcacatgctgaccccaa
cagtcactgggggatttagagaatgccttcctcctgtcctcattcagccagggtatcttg
ctagtcttaggatgttcccatcatgcctttgctctcctagatgcctcctggtggaggccc
cttcgagctttttttgtggatccagcagagcctagcaacctcagagggtgctggcactcc
tgccctcctgtctccaggtcacgtgcaggactatgatcccctggagccaaggtgaggctc
tctacctttgtaaccccagaaaacacacaggatgcaccaagagagtacaaggacatttct
tacagaggcttttacagggaagatattgagcctaccattgtttgaagaatatgaatttca
tttcatctgggggaagggacaaggaagcctctgtctacaggtagaagcagtgtagtgtgg
ctgcacagcttctggagtctccttgccctttgccagcacatgacactatgtgactagcag
ataccaaaataacaacaaatggcttccatccaggaataaagacctctgtagccaatggtc
tttggacttgtactgcaacctgaggtcttttctgggtctctagatgcccaccagctactc
agatcctgaactgaacagcctccttcatcgcatgaaccaaatataccttcctccatgaac
atgccatttgtacagcagcacgtgtgcttgcgtgcatatgtgcgtgagtgtgtgcatgtg
tgtgtgtatgctatatacatatcttgtggcttctgtttttctggaaagtctgactaatac
acttctgtccagaaaacttcaaatgctgtcacatactggccttcttaagagaacaatgta
gagagcagacagtaatggaaggaagcagggcagaagcagtctgggtgcaaatggtccagg
ctcattcagtaggggaagagcctggagacagctgcttctgttctctaaattctacactct
agtacctccgtgcaccgttgctcggggaaaacacaccacatgaggacatgctgtagaaac
taagcaccttttatgaagttggtggtcattctcaactaatctggatggaggagatgcagg
gcacacatcaggacagatttggaaaacagtagctggctctgggagatccatacccaccac
tcctaggatatactaaagagctccagagggcttaggaaagatgcagcatgtaccatccac
cacactgaccacgcaggagctgcccttTGCTATGATACGGGGAGAGGga
Primer
(+)GGTGGACAGAATAGGCTGGA
(+)caCCTCTCCCCGTATCATAGCA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.