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Human element [ hs1021 ]


Position: chr2:59,998,338-59,999,656 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC101927285 - MIR4432

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CAATCCAGACCTCCTGTGAAAGgtaccatctctgaaatgtacttccttttacattgggct
atagtattcttacatggggctatattgtgtcatgtgatttgaagatttgcctgacctgcc
gctgtgatctgatatatccttaggaagcaatggaaaatgtcgaaaacaaaaagcaacatg
ttagcgaaaccctgcttcaaattaaagccctgcctttattggtgaagagatctgctaaaa
gctgttatttgaaatatctgcagatagtttggatctgtgaataattgctatctgcacatc
tcaaattccttatagttttccgttagacatatctgtgagaggctataaatagtgaagcaa
tgtcgctcactgtataatacagtctctctgcttttacaactcatcatgaacttctgtgta
atttattttttattgaagaattccaattaatggcttcctggtgattttaaagcctcaaat
tatcagtctctgaaaacaaagcagagaacataattatcataaactgagaatttttcattt
tgaagcttatctgtttgtgctaagtatcttgtctgtaagtaattagtgcctttatttttt
ttcagtaaaaataatgaccactctatgccacacatccaaattttgttaactgctagatgc
actctatgtattatatctgaaaatggaccaccttggactagttttaaagtatttcatcaa
atgataatagcaacaacaaaatacatctgtttgtcagaataaattatgtggcatgtattt
taaaaacctattatatccttttgctttctttctaagaataaaagcctctgaaaaatatgt
acttgccatttattaccagggctgcataacaagaaaagacccgttttatcttccatttat
aattcctaactgctaatcaaattgatcagccaatagcttggttgtagagggtctttcata
ggaccatttcaaaatgttttaccaaagataaaacaaaattcaatgaaattaaaccaattt
gaatgacaatgtgagccaaacattcctttaggtatctagagaactcaagttttcttgatt
aaaaaaaaatagggtttcactgatgaaataggaattgcctagagagactaagagagactt
ggttgctctgaagccaaacagaatccaagagcagctctcaccacaacgttaggaagttaa
cttcattggttgttttttaattaaaaaatatatatattttttaaattataaaactaacac
acgtaccttaagaaactttaaaaatacagaaatatatGATGTAAAGCACCCATTTACCA
Primer
(+)CAATCCAGACCTCCTGTGAAAG
(+)TGGTAAATGGGTGCTTTACATC


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