Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs1018 ]


Position: chr2:58,809,796-58,811,611 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LINC01122(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGTTTTCCTAAATATTGGGCTCTttttccaattgatttttttcttctcttttcttctctt
tctctctgacttatgttctctatcactgctgacaaaagaaacaaaaagaaaaaaggaaat
aatggaaaagattactttttcctttctcatggactccaaataaaatggacatggtattaa
ctcctataatgatttgctctttgcttccatctgcatatctgatctaattatactaataaa
agaagaaggcaaagggagatattatactaacaagtgaagtttttaacttgcacaagaaac
atttattccctctgctctccactcccctttaaacagctattttgcatcccttgatgcaca
gcagggggagtggcatttgccaccccatggcaaaatggatctgcatgcctctgtacataa
aactggtccatgtgtgatttagctttgcgttgtattgtgttttttatactaatataatat
tgttctagtgcttgcccctgattaaagaaatacataaataaataatttataatttaatta
ataaggtataatatgcaaagcacagtaatttcaaacagcttgtaatgtctctaatgtact
ttcaattttttattttacataagggctatattcattatgtggttatgataaacatactaa
tgaattttattacaggaacaaatttaaacatgtaaatgagatcaaatagtattaaaatgc
aaacgatggtgaaacttattacaaactaaccttgccaacacacatggaatgatgttattt
taaaactttgcaagttgtatcccttaaacaaagacaatgccttttacaatgtccctgaac
ataagaatttgtgaactgcatgctttattctcatatgaactccccaaccaaaaaaaaaaa
aaaaaagttaactagaatccagggtttgcatgtaactttggatgacaattaaaatccctt
ttcttgttccagtgaacagtaatctatgcataattacattcaaatgagatattagcattt
tttgtgcttactctttgttaattgcagagttcactcaccatggtgatgcttttgatggaa
tcaggcaaccttattgacctgatgccgtaaggcgtgttgggaaattctgctgtattcttc
atttttttttttattttggcattttgaggagtcctgctgcttttattacattcctgacac
ttttgttaataaatcattgcaaagttaatgaaaattgcattgaggcatatccaaaataat
tgtgtcctttgtcatgctaataaattgaaagatgttgatccaatgggcgaatgcatgccc
attatggagaagtttgtgatatggttgcctgttgcatttacactttttccttggcatatc
attccatgtaaaatgtgaaagaggaaaacctcaatatgttttatttcatattttatgcaa
tgagcctttaattaagtcagcaaatcggcaaattatatctacatggaaagatagaagtat
ttgtattatgatttatgaaaggttgttaatatcaataggcatcagcaacagtctaatgtc
agactcatgaaaacataaaaaccatgtttaactgacctttctcttatgcctaggaatttt
gcgccacatttatatatgacccacttgatttaaaaatcacagtaataaccgaccattcat
ttcccaaggctcctcctatactaatttaggaagaaagtgaagaaatgtgacttttattta
aaaaaatggtctttttggcaaagcattaggtcttttcattcactaagccttaagTGTGTA
AGGGTGCAAGTGAGTG
Primer
(+)TGTTTTCCTAAATATTGGGCTCT
(+)CACTCACTTGCACCCTTACACA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.