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Human element [ hs1010 ]


Position: chr3:71,590,897-71,592,786 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: FOXP1 - EIF4E3

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GAAAAGTTGAAACAGACCAATGCattagaaagtccatactgtactgcagagatgctattc
ttattgctgtcaaaagactcctggttttaaaacaaacaaaaaaacaccttctagattatt
tattcagacggtcttgcctagtttttaggactcaaaagtcaacactcgaggtttgactct
ggtcaaactactcctttgccacatggcatcacgccgcgcgagacagattttcagtatgaa
agaaaccagcagtttccaatacaaacatgggctttccaatatataaaatttaagaaaagc
cagggtctgtatagaaaacattaaactggcttatatatcaaaatcatgaggtttaagcag
aaatgcagcattaaaataatttacaaaatggctcaacaatgaacattttcctctgtgaaa
aaaacaacacccttaatgtttttcatatggcacataaattttacaatacctgcaggaata
ttttcattggttaaaccaacaccataggtctttttagctcttaagcatattacgattctt
gcctttttatggcatttttgttgttgtttgcacccaatgtaataagcttttgagaacaag
aaacaaaccacaataaaaagaaaaaagaactacccctttgtaactgcaactttcacaaga
ggggtgggggagcagagcgatcgaaatctcgtttttatagctgctatcttgatgcaatta
gtgtaaaataattgtctgcacaggccaaagtagaggctaagttgaggcacttgagtgcat
tcccgaaaatgatttccctgcctcttccttcagcctgctgcagcagatgttggctgttaa
gccgcacagacgacacagttcatgacttttctaagacggctgtgtgccacatctgcagtt
gatgaaatggagagcagaagtgtggcagacacacagaggagagtgtgagcgaggcaggca
ggcgcaggctgggccaaaggaactgtcttgaaggctggcctaaaaatagacacatactca
cactcctccctccgcagccagctcataaaacccggcctgcctgtcctattatggagtcag
cctatggcagacacttcctgcatccagcttgggctgcagataacacaaaagcatggaggc
aagagtggaggggagcaggcggtgtagcatcctcaaactgcagcttcgctctccgagcct
cggtataactgggctgtggtccaagttcagctgggcccccagagaaaggcaatgcttgtg
tttagcccgcacaatactgacataacattaacagatttacatatgcaaaactgtgaagca
acaggcattccccctcaattgacccacagcttgtagtgtctgccgagttattccccgctt
cggctctgtaaccaagtgggcggcatgcgaataccatctgggtaccacttattgaaaact
ggcagtcgctctgtaataggcaagctggcaataagagggaagggaataaattgcatcatt
tagttaacatccacttgctttgcggctgttaaaaaaccatgactgaataataatttggtt
atttcttttgccagaaactgctgtcagccaaattgtactacgcacgctgcagaagtcgac
ttgcaaaatttccacttgagaagggactgaggaggattggggcaaaatgggcaccaacct
ctggctgttagcagtggcgactcctgctgcacagtggctctgtgtcctccaagtgtcatc
atcccaaatgtagttgacaccaagccctggttagccacctggccatgctgagccccagca
ccaagctgtgatgtgtggtaacaccctcaagcagctcagatccaagggtgtatgtgacaa
gtggcatcTACGTGACTCTCAGCTAGCCGT
Primer
(+)GAAAAGTTGAAACAGACCAATGC
(+)ACGGCTAGCTGAGAGTCACGTA


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