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Human element [ hs1008 ]


Position: chr1:38,735,942-38,737,376 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC339442 - RRAGC

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GCCTAAATTTGGGTTCTGGTTCcagcagttcagttctcagggcctcaatttccttatttg
taaaatggacatcatatttcccacctcaaagagttgattgcagtaactcacggaatcctc
acgaaagtgtgccttaccccaacccacagagttggctcctgcccagtgggggcaagtgtg
aacagccccttctgactcaagtccatcttcttatgaaatttgtaatcaggaacttgctat
tccaacccctctgcctggcagtccccctgagaaacaactcccagcgtagacaatgggcaa
aacaaagggcaggaaggaaaggaagtggtctgtcagcacctggggctgctgtggagcgca
gacccacctgagctctgcaggtaggcaatcctggctgggattctgcagacaggcctggag
cagagccccccccaaccccttcccggcggcagcagcagcagcaatagcagcagcaaccct
ccttttttaagtcaaatgttgcctggaagtcattgcttcagcaattacctctgaaaccca
ttgtttcctcagccccattaacatgtcagatcctggcagccgctgacggggcaaacaccc
ctcggagggctgcaattcaatttaaggatcacctcccctgcacagacagcctctgagccg
gcccatctccagatttcaccaaatcgaggagagagtctcagggtgcagtttgatcatgct
gcttcctaaattaaaaacaaaattgtaagtgttaaacatctttaacaagtcattaagccc
cagccataatccagaaaaagtcccttaatgagtaatgacatatgttgtgagcgcacttat
ctcctaatgttggatgctgagatggtgtgatgaaatggcacagtgctcagaagggatgga
tcaccactaatggcaggataattcgaggctgttgggctgaggaccctggagagccaggtt
gtctctcctggatggcgtgcggcggtcctcagtctcccctcctgccctggctccagagcc
ccatccccacacctgaggctgctctgccctcactcccaggctcagctctgctcctggctc
tgccccaggatgggtcctgtaagaatccagaggttgggcaccaggacctttgcatggtct
catggctgtgggtctgcccaagcgcctctgtgtccccacccaagtcactgggcttttgaa
caagccaggcatttctcccagtcctatcccagggctgtccccccggcctccctgtctgct
gcccatccctcccactcaggcccaggatcctgcccacatgcccctgaccacatatttagg
cccctacctgctgcctgagcctccacccactttctgctgagaaccccctgctccagtgct
ctggcccctggctgaccacctctgtagccctgtCTGATGTTTATTTGCCCACGTT
Primer
(+)GCCTAAATTTGGGTTCTGGTTC
(+)AACGTGGGCAAATAAACATCAG


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