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Mouse element [ mm1007 ]


Position: chr18:83,284,395-83,287,105 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: 4930592I03Rik - 4921531P14Rik

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
gAaaGCTGCCTTGCTAGTTCTGCTcactgtttcttgttaaaggttaacagttatcagtgt
ctgtgctgagacttgggaaggctttgcccttgctgagcctgacctgggaaggctttgtca
cccgttgccatggctctgaggcactgggggcctgaacatggctgtgctcgagtcaacagt
ccataaccctctggggagaagggactccatcgctctcagcacttccttcctcccacttgc
tccggtcagacgctgctttcctcagtttctacagccccctgagagtctgttcaaccctga
gccggttggtggatcagccccttgctgaaggcagagtccttatgatgtgttcgtctccct
aaacccaacctttcagtgggtacaagcctttaacgtgatggacctttagaggacatttca
tatcctaagctatagcagcctggcgactggatggccacgtcaatgtgctatagcaaacat
gagcatcaggatttctgtcagggaggagatgtgccacccaagtcatggcggctctttgtg
gagcactgacagttccagtgagtccagtgtttcagtctgcatgtaggaccaactcgtgtc
tctcctcaggagtgtgaacacaggcactgcagaggcctctgtgagtcgggcagagcatga
cacacacaggaaacactcctgtgttgcctgagatctgcccgtcccagggccacattcgtc
tggacacaacacgctgtacccacgggtgacccttgtgactgcccaaggacagaagagaaa
cgcaaagaaatgctcagcccagacaaaagcccattcagcccacgtaagtcacctgaggtg
actctccatcttatttgggccattagactccatacactgcccagcctctctctgtctctg
tctcgacatctctgtggctttctttttctctcagtcagaacatgaggcaacaatcgacat
tttctgcacgcccaggtaccaggttcagctggccttccatctagctgaagtaccatgtgt
aactgtagagttgaattttgcattacattaatcaaagaaacaataggagccataaaaccc
cactaagaggcatttttaacttaaaacccagggctaaacacttgggaattttgccttttg
tcttccccagtgccctgtaaaaggaattagatagcaagagaaagaaagaaaaaaaatcga
ggcactttttccttttttaatttttattttgttgctttttcgcttttcttttctttcttt
ttttctttttctttttttttttgcatgggatgagagaaaacataaaataaattaagggta
gtgggagtgaaataaagggcagaggtaaacgccgtttaattgtgcgagccgctcttccgc
tcctggtccctgccagctgctgctgttattgctaccttcctgttttaagatgaaagcgat
gatggtagacacgtgcagacacacaaaagaacctatttggactggcatgtcagctcatct
ttatcaaatgttgcacaggtatattttgttgccatgcttcattaccccagaatggcaagc
ctgaaatgtttgtctcttctataaacccagtagctttcccagccaggcattgtgtgacag
ggcaatagacggctgtttcttttgcaggcatgggtttgtaaaggctgggcaattaaggag
agggagggagggagagagagagagagagagagagagagagagagagaaagagagagagag
agagagagagagagagagagagagagagctgggaaggaaggaagggtagagagaaactta
tttaaaagaaggaaaatttggttgcattttttcagtatcattaataaataaaaatataaa
gagctatgtcatccatctggggtgtgttttcaaaaggatcctagcagctttgattgagaa
aagcctgacccgtgtatctagattatttaaaataagaagttagaaaaaaaataaagcagg
acactttgacagtaatttctgttatgcagaaaggggcacggtgagcacaggggagctcac
taatagcagataaacaactcaggagagggcgtctggttcggtacaggggaaaaagcctac
tgttcccattccgcctcttatcttccagtggcctactggaaaatcaatgttttaatcctg
tgtgatccagataaaattagaattgtgtaaagcctgcattttcttttcctccccctcaga
gcaacagcgataacgacctttgcaagtcagggcaggaaagctaatgcgtctcccatttgt
tgtttctttgctgttgatcttaataccactgggtctttcaaactcatccccaactgactg
tggcaccaaggggaagccattagcagagggctttctctgtctgggtgggtatgaacacgg
tgcccctggaaggatgtgtactcactgggaccttcatgtgccacccacaaaggtagggac
attcactgctgaatgatcccagcctgggtcaccagaagccacaacctccactatgtggat
gagtatttatttctcctggctgtttggtcttctctgaaaactgtgggagaagtctagaca
gaaatatatagagccctgtccaactgaaaggaagagaagaagtcccatggttcttgatcc
acaccataggggcaaggtgcctgctgggatcctgtcattttgattgtaggaAGGTGACTG
GGTGTGTGTGA
Primer
(+)caccGCTGCCTTGCTAGTTCTGCT
(+)TCACACACACCCAGTCACCT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.