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Human element [ hs1005 ]


Position: chr10:124,902,927-124,904,638 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: HMX3 - HMX2

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGCATAGGCTGAGGTGGGTAATcgggtcctggatagaaacacaaccctcgtcctcactgg
ggcccatgtatgcgcctgggattcctccccacccttccatttccaggacccctaagggta
tcactccagcgacggggcggttctggagacccgagggaagggatagctggagactgcagc
gcgccttctccgagagtcccctggaggtgcgcatgagttgtactagcgcagatctcttcc
ttggctgctgctcctggcgatgcatctccgggggaaacttcccaaagtctgagttgccgg
ggttccaaaaggatccctttgggtttaggcctgggagaggtatagagccagcgagagagc
gcgttgcgcctatcactgaggcaggagcggtgaggtggagtcacctgctgtgcctcaccc
aagcgctaatgtcttaaagaaatataaagaatccccttctttcgtgagctccttcaccgc
cctcgcccccgttggtgatggagtgcacgcatcagattttcatcaaagttctattaagtg
aaacataggttgcagggcaccctttgattgaaacagtttaaattttaattgtgtttttaa
tttgacatatagttgcagaaaggaatgacactgcgtcgccaaggggcggtcgattttctt
aatttctcccagaggaattgatgagtctatcaggccactagattggaaacccattaaagc
tctctggttaggctgttaattggaacttgatggatgtgggggggtggggaggggggtgga
gagtgtcgggactcggctatgctgatccaatcttcatgactttctgttttccaataaatt
acacaattcattttccagcagcagattacataaattgtacacctctggggctctcttttt
caaatagggagcccttttccccaaaagcctattgtgagatgtcatttgcaccaaagaacg
aacagcagaggcccttgaacgaaaatcgaaacataatcaacgtttatacttagaaaattt
attgagatcattttctctggtatttccttattttaaagtttggacgcgccatatatcata
atccactcgcgtgggggcgggggggcagactgtgtttaatatttatcgaagcttgattcc
aagatcaaacttgtttatgacttcatctgtcatttcggagggagccttcttctattaccc
ggctcagccagcctatttcccaactgccgcagagcagagaggatcaatttttattaggat
cctcggcaagtttgctctgggccgctttaatattgagcagtggcataatctcgggaccta
aactttaagcgttctttcaggctcagaaagtttatcattccttggaacctggttatgcct
aattcctaggagagggagacagggggtcgatcccaaagatgcagaggggccatcctccaa
ggtgtgggtattaaactgagtaggattgggcggagctatcccaaggctagggaggtgggc
ggggtgtgggatagtactgagttgaaggattgccactcgttaggggagagacatgaggtg
tctgtgggtggtggttccaggaactgagtgttcctgggagtgagttttgtagctacactg
ggcccaggagagggcgtctgggcctccgtgctcccggtgaagatccccatatgctagaaa
ggggcggcaaGGAAGGTTGTTTCTTGTCCCTC
Primer
(+)AGCATAGGCTGAGGTGGGTAAT
(+)GAGGGACAAGAAACAACCTTCC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.