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Human element [ hs1003 ]


Position: chr6:41,434,455-41,435,695 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: NCR2 - FOXP4

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGCATCCAGTCTTGGATCTACCactctcacaaatttgagtgtccttcaccaagttgccca
acctcttattactcaacaacctcaagctgcttcagtttccccatctactaatgaatcttc
cggtaccttctgccaagagtcagagaaccagagactcccagaccccatttctagccaacc
actttctccaaccagacctgcctacacagggagccggctccctaatgttcaatttctgga
cccctgggtcctcccctcccctccccactggcccccacccatatcctcacaggggcgccc
agctccaagcctgtgtttgtgagctcacaaggaaccacgggacacgggcctttctctctg
ccgtaatgaaaccctttaatcatattcaaataggttactgttcagggggaaaatagaaat
atggatttgatagcaataaatttccctggctggctaagcccagttcttaattgtcctgtc
ccagggctcgcacatttcattgttcgttaggtgcttaagtccccactctcattttgtggc
ggtgacattaccgttgatggctctaatactctcataatttgaaaggggatttgcatgata
gaacgcagagtattaaaagaaaaagaaaaaagggagagagaaaaatggtgggggcaagat
gggaggaggagctcggaagggaaggggggcagcatgcgggggagggggcggatgaggaac
tcaatccagctttcactttaaaaaagtcactttcttcaaagtcaaatcattgttttcatt
aaagtaaaaaaaaaaaaaaaaaaaggaagaaagaaaaaagccaaggctgcacattgggct
gactgggcactggtcttctccgtattgttcctaatggttattaattattattatccggct
gtgcagggctctgtggacgtgatgtccccaatgtccttggggtggagctggggggggcgg
gcgtcaggggaggggctgactctggatggggaggtttgcttctgggccacaagaggatgc
agatgcccaccttgtggcaggagccagtcggagcccagctctagggaggtggaggcgaca
ggggacgctttcctagaaagcaggcctctgtgggaggaatcgaaggctcctgggtcctgg
ccaactcttcttgggcttcctagaagtttcttcttttaacaaccagtgatttaggcataa
ccagccttgctagatacaaGACAGTTCAGGTCACTGATGGG
Primer
(+)TGCATCCAGTCTTGGATCTACC
(+)CCCATCAGTGACCTGAACTGTC


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