Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm1001 ]


Position: chr13:98,661,577-98,663,920 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Gm5086 - Rgnef

Timepoints:
e11.5

Expression Pattern
forebrain (11 out of 12 embryos) 
midbrain (mesencephalon) (11 out of 12 embryos) 

Embryo 1


Embryo 2


Embryo 3


Embryo 4


Embryo 5


Embryo 6


Fasta sequence
TGCCTTCAACAACCAACGTAcacatttgtacaatctaggaccttacagctgcctattacg
tcattacatttggacttactttccacagtctgtaggcagtggggagcagagagttgagtt
tcggacaccaggataatgagccccgctccaccccaagaccaaaacaaaggttttctttga
tgctctctgctttcacatcccagacaactcatcttctgctgctgtgagacaaaggggaaa
aaaggggccagtctaagcaaaattgctccctcccccaagaaggaaagtctagaactgttt
caaatcattagccactccttgccaaccaggagaaggcagtgtaaggatgctgctcacaga
tgcaaagggactaactcacagatgctgaactcatacctcatcctgacctatactgagctt
gatcatcactaatattttattcaagctaaagttaaaaaaaatagtgttcttttctctttt
taaaaaattttaatcaaaaggtttagtccaagctgaaatcaatgttgtcctgaaccagaa
aatgaaacctgaaccagattgaggcctagtttcctttctcatcccgaaggcattccatga
taatttgcccatggcagtggacagccagtctccctcttggtagctactacaccagtgaca
gcacccctggcaggctggatgaataatttaactccaatatgcaaacgtggcctccctgct
aggccgtttaaaaaccatttacacagtccagtttgattttcaagtgttcagacagatgac
gggtcatttgaacctacctgtccaagagcatgtttttgtatatccttatgccgcgtataa
atcagaccaagaaaggaagactgggcagaccacttggccacttcacgtaattgttctgtc
tggcctgggtagatgagaaattcagtggtgtcagcagtgttattggtggtgcgttttact
tggtgggggggggggggagttccgtggccagtgccttcactgctttgcctgaccggctcc
atttttctcctccctcacgtacacaccctctttaattaccaacagcaaacagcgtattcc
acacacttcacaacatctgttctagccttaattaatcgctcacaccgtctccatagcaac
agtgcttagcaggctcagactccacattaggaaaatcttcctgcaagtgggtgactcaaa
atatggccttaacggagatatgtttgcattaattctagtgtcagagctaatgagaacttt
gcacaaggaggtttgcctagaaggatcaagttgtatgattaccgtggtaaaaacaacagc
tttaaaccgggaatggaagaaagcactttcctttttgttttttttttttcacgatattac
aaagaagatgaagaagaagaaaaaaataaacctgcacagctacctttatgttgcaagcga
tttctatgctgagcagattgatgcctttcacgaggcacatgactgttgtttgcagggtag
ttaggagacctcaagtgtttaaaggcagatcttcaaggggtgctttgagccttggctcct
ccgactttaattaaaagcccattgtcctttgctggcacctgcgtatgccttacaccaatc
acaggctgccttgccagcagtgacaaggtggacccaagctttccaagcaggctctggagc
tgccaagggaaatggcaaactcgctcccgcgaatgttttagctccttggcccatgcagac
cctctcgctgatgctggctgcatttatgtttatatttgaagctgttaggttagagattgt
aaaaataagctttggaaagtgccagaaagcctgcttaggcaagaggtagggagaacacag
aaaaaaaaaaacaaacaaaaaaaaaaataaacaaaaaaaaaacaggagtcaggcacttac
ccctgagtggtatttcaaatcagaccaacatccatccatcgttaaatgtttaacttgagt
tgctagcagaggtaaaccattcactgagtgtcccattccttcctccttcactgcccccat
cgacacacaggcaggtaacacaatggagtcatctgaggagaaagaagggaagaaaaaaaa
aaaaaaacccagacaaaattaacaagtaagttgaaaatgaattttaacagacaagtaaga
ttccttttatagaaaaagaaggttctcctccagtgagcatctggaatggggagagcttcc
taaatgctccctggaactgagactccatgcatccctgcgcacagctgacacctgagttgg
ctagagatggagataaattaaaggcctatgaattaaaattcatTAAGAGGATGGGAGCTG
GGac
Primer
(+)TGCCTTCAACAACCAACGTA
(+)caCCCAGCTCCCATCCTCTTA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.