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Human element [ hs1000 ]


Position: chr9:128,666,411-128,667,552 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: PBX3(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGATTTCCCTAGGACCCATTTTgaatgtgagtttttggtttccagtcattatagtctcgt
acttcatcatagaaaaacaccttatttttaatgatggttttattactccagtgttgttta
catccacctggagtcatcccagatttttccattcgtctaaccttgcttgatttcctatag
cacagctcttgttgaagatttatattggtgtggaaggatattctgaccaggattttggtt
tctcttgcaaatatttgtgtatctcttgtttacagccccagtgtcctcttgtaaaaccca
tgcaaaatgggattctaataaatcttgtgctcagcattacacattgtttgttttagctgc
cttccacttcatgcttcctcctttaagagcgagccattatgaaaggttagattcacagtt
agcaggctttagctctcccttttgaatcagtgaggttgccgttttattgctctccgactt
ccacttcagtgatgagagtaaactagcatcagattaaaggtcagcaaatcccatcaaaga
gaggaatattaggggcagagatagttggagaggcagcacaccactgggtattgacagggt
gattccagggtatcagtcagcagaattatagctgcccagagagtcagtacagctttaatg
agcctgtgtgaagaggaagagggtggatttatgtagttcctcataattttctgtagagac
tgttattgcagacattctgtggagtgttctggtctttcatttaattcaaaggtcctggag
cttatccatcctctaaattcctttttgttagctcaaatcaaagttgacatttccatggtt
taccactaaaacacccagttcaaaatcaggtctctttaggtaattttgaaatctgtatat
tgttaatataaatctataatcatatttatcttaatgcatgcatatttcctcttcagagaa
gtgggttgaataatgagcatttcttttcataactaagcaacaagggaagatgtaaattta
cacattgccctctaagtaactgggaaaaaaactgattatgttatggtgattttcagcaat
cttaatgttcatcctccttaaattgactttcctaattaatTGTTTATCTGCCCATTTGTG
TG
Primer
(+)TGATTTCCCTAGGACCCATTTT
(+)CACACAAATGGGCAGATAAACA


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