Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs960 ]


Position: chr2:105,047,627-105,048,798 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC100287010 - LINC01102

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CCATTTGCCAGAAACATTGACTccatcacctctacagctgactagaacctctcgtaggtg
ttttcttccccaagactgactttgttattggaaggaacagagatggcagacgttatttat
ttatcataattgatttcttatcattgttttggggatattccccaaggagagaaagcttct
ctggttccttttaacagtgtggttctgattgccctgatgtctgcccacgacatctgactc
aacatctattagtacctagcagctgtatacacgccaagatgccacagagcttgctacctg
aaaagcccattcaggtggttttgcccatctccaatttcacttacgaaaaaaaaaaagtcc
agttccacaaaaatattgacttcctatctccctgagggtttctggtattagtttgctcta
agtagctcatgatttagagtacaaaggcatttccagagtgcatgtttaacaaaatgacat
agcagataattgaaatttatttgcaattttcaaactacaataaacacaattctccttttc
tttcattaataatcgcacggctaatgcatagcaatccctctgcagcttttacaagcaaac
ttgagctgctgtgttgtaatagctggaaaagttaatgtagcttgaacaaggtttctaatt
gtccctgtctctgtcatatttgtctacttgaatggtcctaaataccacagcgattaatta
ctgcagagcaggtattacaagatgttatcatccttccccaactgtctgggtgaatggaga
gaagcgggagattgttacagtgtttcatctttgctcttcctgtaaggcactttaaccaga
agatttaacgtgtcaaagttaactgcgttctctagcagatattcacattctaattaaaga
ttaagaacgtagtacattacactgtgatttgtcatacatggcttgttaaataggaaacct
accgggattccctaacattttataaacattattcagggcttttaatgtgggcaaagcgaa
agattattcaactgcattgctgtatggaaagcaggttgccctctgctccccactcccccc
acccccgccaacccccagtaaataataaaataagacaacttgggcagtttggaaactgtt
ttgttgtggaGATTTTGTTCAAGCCATGGATC
Primer
(+)CCATTTGCCAGAAACATTGACT
(+)GATCCATGGCTTGAACAAAATC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.