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Human element [ hs770 ]


Position: chrX:139,593,502-139,594,774 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: SOX3 - LINC00632

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ggCCGTGATGGCTTTTTGGCGTCTAggccgctgtcatcccaattccatttctccgaaaag
catcgccgagttaggacgtcggggctttgctaatgtgatgtttgtgtaattaacaccatc
tccccttgtttctgaacatatttcctcccgcagcacagaccagctttcatttgaaaaagc
aacgggaagaacgtcccaataaccctttctaatgggaaaaaactgccccttttgtggaat
ggtttctttacaaagccaacaaccaaccttattttctagttccaatggctatccctttat
gagttatattattaaagaaatccgacactaattgtgccgatttaacttgttaattagttg
caaataaactattcattagtggtaaaataaaataaaacccatgtgtctagatatcattcc
acattcacatattgtagtgtctgcataacataggcatactaaattaagttcctaaaaggt
ttctcctcaggataaataattaaaatatattctactttaattgacattatagaggacata
aatgagcttttccttttagaaagaaatagccatttctaaataaagcttgcagtctggaga
atggaggcttcagccaaatgaatagtcattactaccttttcaacgacgtgggccttttga
tcagaaaagaaattagctctaaaaaacagacaatggaagcctgccctgcaataggaagaa
aattagacggccaaggctcttcacaacacctatttctataaaccatagagctccttgctt
ttcaattacagctgttcatttcatataaggaaaggggaaaaacaggcctctaatgtaaac
tcgctttcaccataaagccttgttcctggctcacagccaggctgcctacttactattgtt
tttagtcctgtcatcaattagctaatactatatattttaaatgactctgggggtattcac
agactccctccccacttccccactcagacaaaacccaagctggactttcatgaaaggact
accattcggtacacagacacttatatacataaagtttaatgtttttattgtttccaaaaa
aaaaaaaaaaccatattgaaaaccctgctttgtttttttttctatatttctcagtccatc
attgaaagacccagacgagatgatgacagagggacataaatgagcagctttcagtattgt
ttctaattgttcacagagctcaatccatctctagataattttgctatgcCCTTTAGACCA
TAATTTGGTTTGT
Primer
(+)caccGTGATGGCTTTTTGGCGTCTA
(+)ACAAACCAAATTATGGTCTAAAGG


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