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Human element [ hs616 ]


Position: chr2:176,754,029-176,755,385 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: ATP5G3 - KIAA1715

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ACTGCCAGAAGAGTGGAATCAGgggagcccccttcacacttcacattaccgtcaatgctc
cactcacaagagcccactcctaagaccaaatgtctcttgactcctattgaaccctgggct
aagccgtcttcctgcagcacacccatctatgtaaaacgctgcaaagaggatataagcagc
ataaaatcttgatagaacaaaataaaatgtgcaccaatgtgcatctgatagatgtagcaa
ttgatttgtggattaggtttttattttcagcccattgaaaagaaataatgtatggaggca
atctagtactaagcattttagaaaatctatttgagatcatttcagcagaagctctggcag
tttgtcataagaggggaggagagcaaaggataattgtctccagtctagtaaaacacagaa
taactgccatcacacttgagtgagcttatagccagccggtcccagggcctctagaagata
gagcagttaatgttcccttttatttcagaggttatgtcacttgtatcacagatttatacc
atgatacagcaatttcatccaaacagatggataatgatgtcaaaggcagaaaccctgttt
ttattgagttttgcaaagattgctcagatagctgcttcaattgaaaagccccaacagtac
ttcagctcttaatctttgtaatctcagtggtattaaatttcatcatttttgtttgaagga
ggaaaattctgcagtaatggcttcctaataggaaacacagaggctgcaaagctgggggct
ctcgatgcggctgctccataagcactgctgatttatagggctgtttatgacagaaaggaa
aattatcttctgcaggtataaatcaggtaaagagtaggaaattgaacttagatatcatct
tgtcagatgcttaatgttcttcctcctgtcactttggataggcccaatttgtagaatact
gcagaggtaaaagaagacaattaacagtgacaggatggtaatagatgaagctataaaacc
aacctgctggtgctggatgctatgtatgattttaagatgaagtgatgccaaaagtatata
ttagctcaaaccaaccatttcctgtgttcagcaatacccagtgtggcacttgtttgtcac
tttcattgagatctacatactacagtttacatattaatgaatccataacatctcaccttt
cctgaaagtcagaggagttccacagtggcttatttgttgtttacttatcaaaagcacaag
gataatttgcttaaggagcaaataaggaggtttctcattgtggtgatcatgcccacagga
gagaaggggacatagACTACCAACCCTTAGGAGCCAC
Primer
(+)ACTGCCAGAAGAGTGGAATCAG
(+)GTGGCTCCTAAGGGTTGGTAGT


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