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Human element [ hs534 ]


Position: chr2:146,797,628-146,799,643 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: TEX41 - PABPC1P2

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AAAGCATACACCCAAATGTAGGActtatttcttcttcaaaagagtatccacttgctgcag
gaagttaccaaaaatagggctagttcccgaaggcattctttctacatttgttgagaaaat
aaagggatctaagcttcctgaccaaagagtccaataaagtgtagctgatcccagcacagg
ctctaagtcgcaaacatttacaagcattggttggttccccacaaaatttccatatgccct
tatttacgcctctctcaaggcataattttgactcacagttaaataatctgtcacagaaag
actgtaaactttttgaaaagttctggttattataatatttctgcatttatattccatcac
atcagtattaaaggctttcagttacagtgctgctggggataaaaagctaaaatgcctttg
ctcacaggtgcattaaatcctattaaagaatcttccttataccacatacctcattactgc
atacaaagggctggattataaaatgaaggtgaagtgtacaaagtatgatttgctattact
tggtgtgcatatgctgaagtcattaggttttacactgtcctcaaatgatagcaggtttca
tattcctattgagtagcttcagtggagactgcttctgggtcaagtagactgacatggggt
tatgtctctcaatacgaggatgagaaaacttctttaagtagatttacacaaggacgagtg
ttctttcctccacaactttattattcagtggaagcatcaggtcagagaacagaccatcat
gggagaatcaaataaaactaaactgaaaagaaaaaaaaaggtataaggctaaattaggtg
atttaaacattttccttaaagcttatacaaaatcctctggctataaaatcctgcataata
ctttcctggatttatatgttgcagacatataaatattaactacttcagagctggggtggt
gaagctctttaggaaaggacaagctttgtctgggggagaatatttcctcacattcaggta
gcttgattccatttcaatttccctacaggagccatttaaaccactctcaaaaggcaagtg
tcagtaaagcagtacattctgaaggtgcattaatgaaagtttcccctctccttggagagc
acgaatctttagttgtctaaataatttgatagcataagggcaggcagttaaaaagtggag
ataaagccaattaattggcttgtaactcaccacagatactattttttaaaaagccagata
tccttctatactatccattattcaagcagcctcttctgctcttgggtgtcagatggggaa
ctgatgagtgtgttctggtgaagacagtaagcggatgttaacttcccactgagagaattt
ctccaggtcgaatagaaaacgttctactaatcatctaccccatgaaaatgccagctgcgg
cccgtggtaggattatcattctcatagacctcttaccgagcttttagctaaatgaaaaat
ctgccatagcctagggagaaggcatcgagcagataagaaagaacagtgtttactaagaag
ctgtgctggtgcaaatagaacaggtttttctgtgatgtaaaaatcataaggaaaccatta
ggttaaaaaaaaaaaagatcaatgtatttacacgtttcatttgcagcagttttataggct
cattaatttaacatttctctctaccttctgtcctgagggtgtcttgtgatttgttattcc
attgctttatttctgttgcaacacttggttacatactgtaaattgccatattgcagaata
acccaaagttttaaatattattatctttttttttctagaaagaggggacagacgggttgg
aagagtagttttacttattttagacacaaagatgtttttttaaataaaacagaacataaa
cctatggacaactgatttggagagaccgcatgttattactactagaggaacaataacaac
aaaaggacagacagAAGGACGAGGTGTCCACTGTTA
Primer
(+)AAAGCATACACCCAAATGTAGGA
(+)TAACAGTGGACACCTCGTCCTT


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