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Human element [ hs397 ]


Position: chr2:60,297,377-60,299,041 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC101927285 - MIR4432

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GAAGCTGGTGGAATTGGAAAagtttccaggacagaagagatgacggggacttgctgaata
cagaggcacttcttcaccaacgtttgcattaagcaaacatagccaggctggcaggctcag
cctctccacccccgtgccacataccagcacaaccagaaatggctgaggatgaaagatcaa
gacttaaatcggagctatgctatgggatatggaaaataaagtgatagaaccatcttgcca
ctgcctgtctcacttagagatgataaggaaacattatcacattattttaaggtaaagcca
gcatttccagagctgattgaggcaagaattagacagtgtttaggggattatgaaaaacag
cttctactacaggtcaacagctaatcagaattctcaggagattttccaaagatttttttt
tttttcctccttatgaataatttcaccaaaggcacaaaaatgggcacattatttagagag
agccttttgatgtattttctctgaataagcatgggtattcgaggatttctgctagttcag
agcaacagggaccaacttattaaatgttcctgctgcaatgcctgcaagctagctgagatt
aatatcagcataacctgttacttaattcattatggggatacaggctaatttgatttgata
ttattttaataaagttctgtgatatataagattgtttcaggctatcaaaataattttcca
gttattacagttattcaagcaagtcctttgatagcagcagttggtcctcgtctgttgtga
atacattagcgctgatgattcatagcagctgagaaatgttaagcctgtgaagcattgtgt
tgatgctcaaatttattctgcaggccattaaaaaaaaaagaaaaaatattttgtatgcat
caagcttacacgtgtcattaacacagttcattttttaaaaccagtctttcatagaagaca
gggtttttgcaaagaaaaaaatctgctgctcgctttgaaattcattgatgctgttttaca
tgttttttatatacagtttgcatcagcctgtatattaagtgaatcaaatagttctaaaaa
tgatgcattctctcattgcagggggtattgtaagccattacaatataaactgttccagtc
cacaaccctatatgttcatttggctgtcatgcagacaaaagcttttaatgttgttaatgt
gctctgtttaaaaatcccatttctgcttttatgccatttgcagatatttcatttggtctt
tacccttctttcaaaagggaggaggaaagaaaacaaaaatgcctctaccagcagtacaaa
aagaagcaccctgttagagactgtccctgtccttccctcttcacaccccattcttccttc
tctactccccctccctccgcttcctctctgtcgctgctcaagtgggttgtcatgtctgtc
ggtccattccagggaggatggtaggaataaaaaatgcatgctatcatttggcagatgttc
aaaagcttgagctaaaaaatattaacagacctccactgtcacctcctcccttcagactcc
gagcgctgcttctctgaatccccgcagcaaacttcctacgcctggggtgggtgccctgct
gtcagttcataatccacactgtggcCAGAGTGGTCCTCTTCCCAA
Primer
(+)GAAGCTGGTGGAATTGGAAA
(+)TTGGGAAGAGGACCACTCTG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.