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Human element [ hs220 ]


Position: chr7:114,070,779-114,073,266 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: FOXP2(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CAgCTGTGAACATGTGCTCAGTCTTTTtgataacctagaaagaatgtttctctgatgcca
atatttaattttctcacataaacttatactcgcttaatctcaattgacaagcatctacca
aaatactaggtgtttctaggttaagcacacataagatatttacttcaatactcatgtaaa
agatccacaacaaaatggtaataagcatttatgtaatttgtctcatgaattgggtatact
ctcgtttctattaacacttttttcatagaaatggattttttaatttataaaaaaggattt
aaatctatttactatgcagtgttgtgtatctacagtgcattcttaagttccattcactat
aggtacaagtggtagcatattcattgtgcctgtcttgcatgaaagcatttactgaagaaa
tatgacaagaacatgttcagctaatgaggtcgaatggttgttacattaaatttaggcggt
gttttctattaggttttatttatctgtatttgcattcaatcctttcacatttgttatctc
tcgcccaattccagggatggggcgccttttctcatttcacagccaattgttactgtgcgc
tgactctgtaagttgctggtgaatgtaaaagtgactgcaattaacctgactttgttgctt
gaggagaatttgagatgagaaatctgacagcaaatgacaggcatttttctgggtttagca
cagaagaaagtctaagtaacattgcaaagagaggcattagggagtaggtacctgcaaatt
aagtggctgacactgtctattgagaatttagatagtaacggctggaatttttatgttaag
ttcacattattttatattcatagcaagcttccttttgagcatttcctttgtgactgtgca
tgatctcatttattgtaatttgtattttttggttgatcagaagatggctgtaattgtaat
ttttattaaagcacattcttaacatgtaagaatgcatatatttagatgaaaacaatttta
tttttgagaatggattatgtgaacttagattttaatatgataacagcctacccctaattc
tcagagatataatgtgaaatggtggaaaactttgagcaataatactcatggcaggtgagt
attttttttaaataatacagttcaatatcagtatacttatcttgtcatttatttctgttg
aactgaaggaaagaagtctgactgtacagtcataattctgtcttgcattaactggctagc
tatgcttttagcaatagttatttttactttccaaagcctgttggttatgtagtttgaatt
acaatctttgccttcaaaagcacactctatacaactacctcctgctagtagatagtaccc
acacagtatgcaacatttattgtatttgtcaggtgtttaagaggccattgggagttttaa
ttaatgtcagttaggaagatacattgttcagttggaagcagcttgccaagttcttcattt
tcctataatccatatagtctactgtctttagggaaatatgcaaaattaaaagttacactg
catgctgttgtctttacaacattcagctcatcaagcaaaactctcatgcaaattttaatt
tgcccttgagcataatttagaaaccataatcattgaggttttacacagcacagataggaa
aaggagattggattaatttacactctcttattcaaatgacctcattacttttatggtaca
aactaaggttttgcagctgactgtataggtaaagtactgttaagggtttaaaaagtaata
attttctagaatttatctttaaattacattttttaatatttggttaaagacatttctttg
gagatctttaaatatcctaaagtttatgtattgatttagaaatgggaaaatgtggcatct
atttacatttatcaagtttaactattaggtcttggggccttctatttacttgaaggatct
tttcatgaattctgtttcagagttaactttttactgttttcagtaatccctaaagaagtg
tacacttggcctgacatatagagttgtcgtctaccacatgatgacactaaagatatatga
tatgactgacagtgtagttgatgtgcgttgtcttccctagacaaaacagatggtattgtt
ctattatcatccacagttattttaatgtactgtgtccatctgtgttaagatatattacat
ggtttcatggaatttacagttcactcctgcagtaactcgatttcactgtttggtctctag
agagtttgcaaaatgtcaagctgtagcttgaaaaagaaaagtgaaatctactggaaacta
atacttatgaccatttcatgcctgatctgctttgtggtgttgtttagaagctagggtgac
gtttataatacaacaggtaaaagaaaagattgtttaatgcatatgaaaaattgtaactgc
tcttatTGAGCATTTGTGTCCTAGTCCA
Primer
(+)CACCTGTGAACATGTGCTCAGTCTTTT
(+)TGGACTAGGACACAAATGCTCA


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