Mouse element [ mm2189 ]Position: chr13:15,149,179-15,154,258 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: AW209491 - Gli3 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence TCTGGAGGTTCCTCAGAAAGTTggaaatagatttacctgaagacccagctatactactct tgggcatatacccaaaagatgccccaccatgccaaaggggcatgtgttccactatgttca tagcagcctcatttgtgattgccagaagctggaaacaacccagatgccccaaactagaat aatggatacagaacatgtggttcatttacacaatagaatgctactccgctattaagaaga aggacatcatgcgttttgcaatcaaatggatgaaactagaaaatattctcctaagtgagg gaactcagacaccaaaagaaatgcatagtagatattaaccaaaaatgtacaaaataccca gtacacaacccacagaactcaggaaggttaacaagctgaaggacccaagtaaggatgcct caatcccacttaggaagaagaaagcagtcatgggggcaaagggagggagggaccaaggta agaggggacagggaagggagcaggggaacatgatcaggtattgggggggggagcaggact gaggccctggggaccagcagagagatgggaaataggcaatcttggaaggtaggaggtagg ggaccttctgaagtgtgctagagacctgggaggtaagagactctcaggactcaaagggag ggaccttggatgcagtgctctacagtggggagggggaacttgtagagtctacctccagtg gaaggacaggacatcaagtagagggatgggttgccattccactgtcaaaagatctgaccc agaattgttcctatctgaaggaagagcaggaacaaaaatggagaagagcatgagagaaag gaggtccagtgacagaaccaaattgggaaccagttcaagaggtgccccctgacactgata ctgatgctgtggtatgcttgcagacaggagcctagcatggctgccctctgagaggcccaa caaacagctgaaagattccaaagcagatagtagcactcaagcaaaggacagaagccagaa cccctgtggttaaattgagggggaaagctggaagaagctgaggaagagggcagccccata ggaagaccagcagtctcaactgatctgggtctccaagatctctcagacactgagccacca accaggcagcattcaccagctgatatgaggcccctgacacacatacatcagagggctcaa tgagtaaagatgacccaggaggtgggaagacctgttggggtgggggtataaaggtgggac atcctcttggagacagggttgggggcagaactatgggatggggagtaataaaggggcaga ctgagagggggatgaaatctggactgtaaaaaaaaaaggattaaagaataaaaataaata aaatttttgaaaagaaaaaaatcaatgaccctgagtataaaatgattaagaaattttgga tacaatgtaaagagtaagaaatatgttaactgttcattgtgtttatatgatcatttgtgt atgctccatattctatgtgttacaaaaccatctatatcttagcaaaatgcgctcctttat taaaagttaagattctaaatttaagagaacattgtgtcagagtatgattggcagcacact ttcccttcctgtattatcatgctaacaatggcacatcatatgatgaaacagtggcattta tctaaatggtttaatttttctcttatgcactaacccttttatgtcaaattgtatttaaca actaattttagtcagagattctgcttattgtaccacactatgtagattggtctaatattg ctttgtgtccagcttcatattttaaactcatgctctcttttctagttcattttattattc ttaatcttcttattcttctagctttcagtgaaacttggttgcattctttttctacacccc cattcctgtcctgaccctgctccatcatacttcttcagtagcttgcttggatcacatata agtggttccagtctcaagacccagcttggatgaacccagccaagataacccagccttccc tcaacacacacaccttactgcctgtaactgtttctccaatcagtcaactaatagaaccat cacttgtagcccagatcagcttggataaaaactcctccctcattgcctgttcaatcctga gagtatgttcaagttaaactcattcacacatttttgctcagtatggaccaagcagttcct ccgtgacagctgctcctctttgatcagctcaacagaggacactgaaagaaatacttgtaa ccgaagaggataaaaacaccagcaccattgtcccagatccaagcatggtggcacacacct gtaatctgggccacatcatcagcttaagacctacgtaaggacattggaagaaggaagatt ctctctcctttgcctgcttgcattgtaggactgagcaactgctagatccttgaacttcca ttcacagctactgctgttgaccattgttggggggttggactacagaccataagtcatcag caaattcccttactatatagagactacccataagttctgtgactctagagaaccctgact aatacagaagttggtaccagcaatataccttttcagttttgcctcaaggatattttaact cttctgccctgtgtcataacttgatcatttgtctctttcacaaattatcacattggtaca ctatattgatgacattatgctgattggaccaggtgcgcaggaagtagcaaccactttaga ctcattgataacatatttgtgtagcagaggatgggaaataaatccaaccaaaattcaagg accttctacctcagtgaaattcttaggtgtccagtggtgtgaagcatgcagagatattcc ttctaaggtgaaagataagttgttgcacctggcccctcccaccaccaagaaagaagcaca acgtttagtgggtctatttggattctggagacagcacatccctcacttgggtatgctacg caggcccatttaccaagtgactcagaaagctgctagctacgtgtgcagcttggaacagga gaaggcttgtcaacaggttcaggctgctgtgcaggctgctctaccacttggatcatatga tccaacagacctgatgatacttgatgtgtcagtggcagatagagatgctgtttggagcct ctgtcaggcccctgtaggtgaatcacagaagagacctttgggattttggagcaaagctct accatcatcttcagacaactattctccctttgaaaaacagctcttggcctgctattgagc cttcatggaaactgaatgtttgacaataggatatcaagttaccatgtgacttgaactgcc catcatgagctgagtgttattagaccctccaagtcgtaaagtaggacctgcagcagcagt ctattataaatggaagtgatatatatgtgatcaggcctgagcaggtcctgaaggcacaag agagttacatgaagaagttgctcaaatgcctatagtttctattcatgttacaatgccatc tgctgccaagcatgcacctatagcctcatagggtgttccctatgatcgattgactgaaga tgggaagactaggacctggtttactgatggctctgtatgttatgcaggtaccacccagaa gtcaacagctgcatcattacaacccctttccaggacaaccctaaaagatacaggtgaagg aaaatattcacagtgagcagaacttcaggcagtacacatggtattacattttggaagaag aaatggccggatgtatgattgttcactgttccttggctgtagccaagggattgactggat ggtcagagacttggaaagaagctaacctccaaacaacccaatcaaaaattggagtataga gctgaaaagagaattcacagcagaggaatcttgaatgaccgagaatcacttaaagaaatg ttcaaagtccttagagatcagggaaatgcagaataaaaccaccctgatattccaccttac accaatcagaatggctaagatcaaaaactcaggtgacagcacatcattctgtggagagag aggaacactcctccattgctggtgggattgcaaactggtacaaccactctagaaatcaat gtagagggtcttcagaaaattgaaaatatatctacctgaagacccagctataccactctt gggcatatacccaaatgatgtcccaccataccacagatgcacatgctgcacaatgtttat agtggccttatctgtgatagccaaatgctaaaaacaacccagatgtcccacaatggaaga atggatgcagaaataaaatacatttacacaacagattactattcagctatttcagaatgg gggacattataggttttgcaggcaaatggatggaactagataccatcattctgagtgaag taactcagacccaaaaggacatacatggtatgaactcactcataaattgatattagccaa aaaatacctagggtacaatctacagttctcaagaaggttaacaagcagcggggcccaagt ggagatacttcaatcccacttaggagggagaagaaagcagtcaatgggggcagagggagg gagtaacctggtgggagaggggaaggggaggggaataagagaacatgatcaggtatgagg gtgaggagacaggagagaagccctgagggctaacagaatgaatggaaatatgtaacctgt gggttgggtggtgggtatactctctagaaagtaccagaaacctgggaggtgagagactct caggacttagtgggaggaaccttagatgaaatacccaatagtggagagagggaactcata gaatccacctccagtagacagacagggcatcaagtggagggatgaggttgccatcctaca gtcaaaatttctaacccagaattattctgtctaaaagaactgtaggaacaaaaatggaaa aatgattgagggaaaggtggtccagtgaccagcccaacttgggatccatctgaaggggag actccaaggcctgatactATTACTGATGTGTGCCTGCAGAPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.