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Human element [ hs197 ]


Position: chr1:51,098,841-51,099,913 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: FAF1(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
gcCaGCAGGGTTCACAAGCAATTTagaagttgggtgcatttacttattaaacaagtggct
aactgtattgccactaatagcttaaaatgtccaaattaacttgttacatatggttggcga
acatgtattgattctttaaagttttattcgtaaaatcagtcctgtatcttctaacctgtc
ataattaattccatctccttgcactttgaaatctccacaataataagaactttatcaggc
tggtgttggtatgaagtggcacagcaaaacaaaatcccaaggggagcagtccacagactt
ctcttctaagcagcaaaaagctgttatcattttctgaattacaggaactataaaaggaca
ctctactcaagctgccgctgaatgtcacctgaaaagcaatcacaaaagggctctgtcttg
gcttatctctgagctctgtcactacggcaaccagcagggaataagtatctgtgggtctat
gaatttcagaatcccataaaagccagggctaaaaaggcatgtgcagcctctcagagattg
actgcattaatacattagcaaatactgtgaaacactggataaatgtcagcaattatggaa
aaagcgtctaataacgatattcgttgcctgtcaaacccccgtgaggtttgatatgtaact
gccactcaaagctgtctgtaattttatctcttttatacatctgaatccacagcattcaaa
tttgtactttgaaagtaataaactgtaaagcagttcattccatgttgatcacaattgtca
acaaacatacaataaaagaacaaaaagactttcattggctctgggaacaatcagtaccag
caatctcctgtggatatttattttttaaaaactatatatattctacatgtagaatattaa
acaatgtcatgatgcgaagcaacaattgatttgactgttgattaagtcaccttgggttca
aaaggctacttaccatgcataaatgttcattttcagccttccttttgggtgagaaaattt
gtaagactttacagccaattaaacacagttgtaAGCACCCCTCTATTTTTGCA
Primer
(+)CACCGCAGGGTTCACAAGCAATTT
(+)TGCAAAAATAGAGGGGTGCT


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