Mouse element [ mm1898 ]Position: chr13:15,523,946-15,528,667 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: AW209491 - Gli3 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence GTTAGGAGCCCTTTTGTTCCTTttcacatgttatcaggtgattaagatagggctgaaaat tctggatgaaattcagggcaatctatcagaagtaaagcggggagagagagtaggagcaaa gagaaaatatggtacacaaaataagtatacaggcctttccaagggtcttgaacccgagga aaagtttaggtcaggtaagaatacctggggagagattagaaggaaggaaaagaaaaaaga aaagaaaaaagatcgattagcggaggtctctaggagatactcgtcactagatgagctcag gaagccagctcttagtagttctgaagcagatgaagaattctcctctgaggaaacagactg ggaggaagaagcagcccattaccagccagctaattggtcaagaaaaaagccaaaagcggc tggcgaaagccagcgtactgttcaacctcccggcagtcggtttcaaggtccgccctatgc ggagcccccgccctgcgtagtgcgtcagagatgcgcagagaggcaatgcgcagagagatg cgcagagaggcaatgcgcagagagatgcgcagagaggcaatgcgcagagagatgcgcaga gaggcagtgcgcagagagatgcgcagagaggcagtgcgcagagaggcagtgcgcagagag gcagtgcgcagactcattcattcccagagaggaacaaaggaaaatacaacaggcatttcc agtctttgaaggagccgagggtgggcgtgtccacgctccggtagaatacttacaaattaa agaaattgccgagtcggtccgtaaatacggaaccaatgctaattttaccttggtgcagtt agacaggcttgccggcatggcactaactcctgccgactggcaaacggttgtaaaagccgc tctccctagtatgggcaaatatatggaatggagagcgctttggcacgaagctgcacaagc gcaggcccgagcaaacgcagctgctttgactccagagcagagagattggacttttgactt gttaacgggtcagggagcttattctgctgatcagacaaactaccattggggagcttatgc ccagatttcttccacggctattagggcctggaaggcgctctctcgagcaggtgaaaccac tgggcagttaacaaagataatccagggacctcaggaatccttctcagattttgtggccag aatgacagaggcagcagagcgtatttttggagattcagagcaagccgcgcctctggtaga acagctaatctatgagcaagccacaaaggagtgccgagcggccatagccccaagaaagaa caaaggcttacaagactggctcagggtctgtcgagagcttgggggacctctcaccaatgc aggcttagcggccgccatccttcaatctcagaaccgctccatgggcagaaataatcagag gacatgttttaactgcggaaagcctgggcattttaagaaagattgcagagctccagataa acagggagggactctcactctttgctctaagtgtggcaagggttatcatagagctgacca gtgtcgctctgtgagggatataaagggcagagtccttcccccacctgatagtcaatcagc ttatgtgccaaaaaacgggtcatcgggccctcggtcccagggccctcaaagatatgggaa ccggtttgtcaggacccaggaagcagtcagagaggcgacccaggaagacccacaagggtg gacctgcgtgccgcctccgacttcctactaatgcctcaaatgagtattcagccggtgccg gtggagcctataccatccttgcccccgggaaccatgggccttattctcggccggggttca ctcaccttacagggctaagtagtccaccctggagttatggattgtcaacattcccctgaa atacaggtcctgtgctcaagccctaagggcgttttttctattagtaaaggagataggata gctcagctgctgctcctccctgataataccagggaaaaatctgcaggacctgagataaag aagatgggctcctcaggaaatgattctgcctatttggttgtatctttaaatgatagacct aagctctgccttaagatcaacggaaaagagtttgaaggcatccttgataccggagcagat aaaagtataatttctacacattggtggcccaaagcatggcccaccacagagtcatctcat tcattacagggcctaggatatcaatcatgtcccactataagctccgttgccttgacgtgg gaatcctctgaaggacagcaagggaaattcataccttatgtgctcccactcccggttaac ctctggggaagggatattatgcagcatttgggccttattttgtccaatgaaaacgcccca tcgggagggtattcaactaaagcaaaaaatatcatggcaaagatgggttataaagaagga aaagggttaggacatcaagaacagggaaggatagagcctatcttacctaatggaaaccaa gacagacagggtctgggttttccatagcggccattggggcagcacggcccataccatgga aaacggggaatccagtgtgggttcctcaatggcccctatcctctgaaaaactggaagctg tgattcaactggtagaggaacaattaaaactaggccatattgagccatctacctcacctt ggaatactccaatttttgtaattaagaaaaagtcaggaaagtggagactgctccatgacc tcagagccattaatgagcaaatgaacttatttggcccagtacagaggggtctccctgtac tttccgccttaccacgtggctggaatttaattattatagatattaaagattgtttctttt ctatacctttgtgtccaagggataggcccagatttgcctttaccatcccctctattaatc acatggaacctgataagaggtatcaatggaaggtcttaccacagggaatgtccaatagtc ctactatgtgtcaactttatgtgcaagaagctcttttgccagtgagggaacaattcccct ctttaattttgctcctttacatggatgacatcctcctgtgccataaagaccttaccatgc tacaaaaggcatatccttttctacttaaaactttaagtcagtggggtttacagatagcca cagaaaaggtccaaatttctgatacaggacaattcttgggctctgtggtgtccccagata agattgtgccccaaaaggtagagataagaagagatcacctccataccttaaatgattttc aaaagctgttgggagatattaattggctcagaccttttttaaagattccttccgctgagt taaggcctttgtttagtattttagaaggagatcctcatatctcctcccctaggactctta ctctagctgctaaccaggccttacaaaaagtggaaaatgccttacagaatgcacaattac aacgtattgaggattcgcaacctttcagtttgtgtgtctttaagacagcacaattgccaa ctgcagttttgtggcagaatgggccattgttgtggatccatccaaacgtatccccagcta aaataatagattggtatcctgatgcaattgcacagcttgcccttaaaggcctaactaact aactaactaactaactaactaactaactaactaactaactaaccttataccgctgcacag gttcaaaccttggcagccacatctaatgattgggcagttttagttacctccttttcagga aaaatagataaccattatccaaagcatccaatcttacagtttgcccaaaatcaatctgtt gtgtttccacaaataacagtaagaaacccacttaaaaatgggattgtggtatatactgat ggatcaaaaactggcataggtgcctatgtggctaatggtaaagtggtatccaaacaatat aatgaaaattcacctcaagtggtagaatgtttagtggtcttagaagttttaaaaaccttt ttagaaccccttaatattgtgtcagattcctgttatgtggttaatgcagtaaatctttta gaagtggctggagtgattaagccttccagtagagttgccaatatttttcagcagatacaa ttagttttgttatctagaagatttcctgtttatattactcatgttagagcccattcaggc ctacctggccccatggctctgggaaatgatttggcagataaggccactaaagtggtggct gctgccctatcatccccggtagaggctgcaagaaattttcataacaattttcatgtgacg gctgaaacattacgcagtcgtttctccttgacaagaaaagaagcccgtgacattgttact caatgtcaaagctgctgtgagttcttgccagttcctcatgtgggaattaacccacgcggt attcgacctctacaggtctggcaaatggatgttacacatgtttcttcctttggaaaactt caatatctccatgtgtccattgacacatgttctggcatcatgtttgcttctccgttaacc ggagaaaaagcctcacatgtgattcaacattgccttgaggcatggagtgcttgggggaaa cccagactccttaagactgataatggaccagcttatacgtctcaaaaattccaacagttc tgccgtcagatggacgtgaccCACCTGACTGGACTTCCATACAPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.