Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs172 ]


Position: chr5:77,020,605-77,022,508 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: TBCA(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTTGCCTTTTGCCCTGATACacttcaggaaacgtgtacactagagtgtacatttctagga
tttttgtgttaagatttaagtcctaattataccatgaattaggaaatacactattctgat
ttactctaagaaatgtttatataaattcgtaacatcatcacagtaataaatcaactatta
aaagactgtcctgctctttcaaaaatacctctcagctcacaaccttttctttcttccata
agctacctgccaatattatacagttagcccaatgagaggtattacctgagacggcttttt
tatttgtagacggatgatgtagaatatactccaatttctgtctatgcatgtgacagctct
aaactacagccagttttatttttataccaacactataaatccagccatttgcaatccagc
tgcatgctcattagctgcgaaccgtagcggttcagctcatttctgctcattctactaatc
tcctgtctttactccatttatttgccacttttgctgctgctcctccacaaaatacaacac
tgccccttctaagattaattgatcatcaatttaatcctaatttggaccaagtcaggtggt
aaatggaccacttttgcttgattgttagtgaaatgtgtgcaagcacattgataaattttg
attatttatcaattaccaccaaatgaagtaaatctattgaataaattctagcctgattgc
tataatagagtttgaaaatatcgctattgataatgattctcgctaatagtcttttccgac
tgcagttgctgggttgtcggcacgacaacaaagaattcatttttcataacatcagccgcg
tatgcctcagcaatccttcattaatcagttacattatggggccgttcctccgtaatgtgt
gttgctttgctcagaaagcctaaaacactttgtcatattttatgtcaattaccagtaatt
ttaatatccttccatcaggcatcttgtaatagttagcatatgctaccataagtgtcttaa
ggctccttgagatgagttatattgcagatacagttgtgtttcgtaatgccgtctttggaa
tgcaaataacaaaacgacaggctaatgaaaaaatgtcccttgatcttaatttcttattgc
acaggctaagtcacttatatgaagggtggagctgagattattttaaatgaatctgccact
gtgttttcccaaagttaatggaaaagcagctctctggaaaatggaaaaaagaattagact
cgacacacattcaactactctaatactgtatttttgagccatgtagccagtgccagttca
agtgacaaaactaaattactgttgtcattttattaagggtatccgctgtgtaaggagcta
actcaaatgtgcaaaactgtagaaaagccatgcacagtatttttaacttccaaagaagag
aaaggaagcagtggcaatgcttcattttactttacactgtgactgcaggtcttgcccaag
gtcacactttagtaaatgtgcacccagcactgttgcagaattataaatggtctggaatgg
aggccactgttcgttgaattctatttcagtatcagaacatgccatcactgtgtaaaacag
atttcttcattacatgcaggaaaatcatattcttttgagctttaaggagaaaaatagttg
aacaataaaacaattacttaacacatgcttcagagagtaatgaaaaccttaaacacccca
aactgaaaacctctattaaaaaaatactattggatgtatttatgaggttattatttgtag
tatccattccagtgtcaaataaaatgaaaactcatttaatattctctgaattcattttca
tctgtagggaaagaattcttcttcACTTCCCCAGCTTCCAGTTT
Primer
(+)TTTGCCTTTTGCCCTGATAC
(+)AAACTGGAAGCTGGGGAAGT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.