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Human element [ hs1443 ]


Position: chr1:198,339,402-198,341,607 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: NEK7 - ATP6V1G3

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ACCACCCACCCAATGAATCTtattatctcaaatattttggcagtttcattctcagtgatt
ttatgatttcttggaattttttccttcaagttacaaatgtgttttgtttccttctatttt
caatttttattaattttggtatagaacattaatttccatataaaaatgtagaatttttct
gaattccacagttaatttctcaggaggaaggaaactgttaacataaggttaaccaataat
catttctacacctgacaaacttactccacatcagaactttagttcactaatatctgcatt
tatgctcattaacacagttcactagagatttatgtttatgggttttcactgtcattgaaa
tgtgttattctttccattccttgcatattgatactcatcagacctatggtttatctaatt
tgagttgagtgaagcagaactagattaagtccagagggaattagaattaataaggacaaa
aaccttgtgttcaaatatttttttttaaaaaagcatgacatagaatataagtattgcata
ctgctcagttcaaaccactttgaggggaaaaaataactttgaatctttggtagaaaaacg
gatctctttatctttgttgacataataaacattgataaaatatggctgatttttgtttct
atttccttttgcgttcttcaactctgggttctttctttccctagtttgtagatgtagttc
ttaaatgttccccatttctttctgatactttttgtttaccttcaattttctatctttttc
cccttcctgtttcctctgctctcctccttttttcttttctctctttccaccttacaacgt
tgtttaagcatgttgtaaacttattcattccccaaaggcaaaaacagctatctgagcaac
actttgtcagcataatacatttacagaatgcatatttatgaacctttgagcttttattgt
tgcagagggcaaataaaaaacatgaaaagtagcaatatagtgtttcaaaggtccctcaag
gaaaacaaaagtagctggaaataaatttggaaaaaggttcttctgtaaaaacaaaacctt
gaatttgtacatgcaaaaggttgaatagtagaaaccatttttgctcttcctcctaaacta
agacttaggaaattttaaactttttaataggtctagcctcttaaagtctggaaaataata
attttaaaaggggattggatataaatgtttataatccacagaatcttaaaacagcatgtt
gcatttggctgtaataaaaaaaaagaggaaggagggagacttaaattgaaaagcccatct
tacttccaattacaagtttggcttccagcatggagtcttatactaaatgagccagattaa
agagttcaggactggaaatgaaactctaataaaatgtcttttgaaaggcttattttaatt
gatgttagcaaatttaatttctcataattaaattctcattgtattccatagctctctaaa
atgaatagttgattaatatttaatgcttggtggggaagtggccaaatacaccactgtcca
gacagaatggggtaacccagagcaaaagagaagcctagaggtgagaattctgaagcattt
tgagggaaacctgtgagcctcaaatcttcatatgtacatgaagggccaggggtgtggttt
tttcagggtcatctttgtccttcaatatattccatttatcaatgctgtcagtttcaagct
ctcagtaaacaaatagcgtatctccaaggtctgtatctaaaaagcatcaaaatggacctt
ccaactttgaagttctgcagtttgcacagttaggaatggaagattatctgtaaccattac
cctaaaatcaacctttaatcactgggcagtttctggcaatgagctgagcctaaatcaggg
agtttcaaacagaataaattgaaattaagctccaaatcctatttgcagtggaaagcagtg
gatttcttagactgagaactattgtagtattcaatttccattgaagaatgtgtgctagag
agtggtacatccctaaagatcctattcatcctgtcatgtacactttagatgtaagtccat
aataacacttagaaatttcttctgtagagagaaaagaagccctagtccccagcttattcc
acatttctcttcaacaatagagttttCTTGGCTCCACTGAATTTCA
Primer
(+)ACCACCCACCCAATGAATCT
(+)TGAAATTCAGTGGAGCCAAG


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