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Human element [ hs1396 ]


Position: chr11:126,797,947-126,800,656 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: KIRREL3(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GATGGCGTCTCACAAGGAGTtcagaatctaatgtgctcaaatcacacaagtcattgccat
aagtgctaccgtcaatgtatttttaaaaagagcccagaaaagagagattcactctgcata
ggagcttcactggccttgaggatgtgcaggagtttgctaggtagagaagagatgggatag
atcccaccagtgggaagatcaggaacaaagctcagatatctggatgtgcacccagtgttt
agggaatggtggatgtggggctagagcagaggtggggaagaaatgaggtggaaaagttga
ctggggccagatgtccttgggccttgaaatccttcctacttcatcctttaggcaatgggc
agcgattcccggacataggtccagaggctgggattgccctgatcagggctggttttggaa
agacagctctgaaattagtgtagggaatgaacttgagaaaagaggccctgcaggcggaca
ctgtcatgagctggaggctgaagcctgggaccccgacgtggtggcgaaaatcagggaaaa
ggcaggactggggctatttcagaagtgttagccatgcttgggggagagcaaggtctcagt
taatgcaaaagaccctcaccagcatgactgggtggaaaaggatgttttaatggacataag
gaacacagcagatgtagagttttattttttttctttttaaagttggtttgttttgttgat
tggtttggaggcagaagaggtcacgaaggagagggaagaattaagttaagtttgtggcgc
ttatgagctatgtggatggtggtatctagtttatttctctgagcttaggtaaaaggttaa
ggccaaactatgggcttgggagccatgagcaaacccatgattggtcaaactatgagaatg
aatggatgaaataaatcaacatggacagaaagagagagtaaaagaaaagagagagaaaaa
tcagagatagaaagacagaggtcaagttcagatgtacataccccttaggagcttttcaag
gacgtcggcagggagctgggtttacagagtggagaggacacatctgccaactgtgactga
gcgtggtcagagggaggagaaaaggcacaagagagcaaaacatcttgcaagctaatggag
aatagaattttaaggaggacagagaggtcaaagtccccaggaagtcaagtgacaagatgt
ggtcatagtgtagggatgagtcccagagcctcctcccaggtccaaaatgtagctaatgat
ccgaatgaaatccagacagggagtcaagacagggaaggtacaggcttgtgggtgctgagg
gtgtggacaggaagagaggcaggagactcagagtgaaggggagaggccttttgtgtacag
aaagaaggaggtcagttccacaaatgctgccgtctggaatgcagaattttctgacttgcc
taaaaagatcgaaacaaaacctaagaagcagaaaacaaataaaaataagacaccaaatac
caaaagccaaataagaccacgtaaaagcaaacagagcctcctcaagccagagaggcccct
gacccagttttgcagcagcaagacccagagttccatccaggaagcaggctgcggcagtga
gtcgcccaggcctagaaaccaaaaatccagcctgcctggagtcctcttgggtatgaaagt
tcctggagaatctattcatggcttccaatttccattcatcaggctgcacatttgcctaag
agcgattccacgctaaacataactcagcccagaaaaatgctcctctgcgctctctttcca
ctgctgaatttcagcttggcttaagtaacaccatgtgacataacacaaagaggtgaaatg
agagctcataattgcatcagagggctgtgggggagccacccccccccccccacctcaccg
attcccaagtacacttgagggaggaggaaggaggggtgtgtaatttgttcatttcttata
ttttatggaacacttcactttgctttcagcataattatttgttgtacattttgctgattc
ccatttgtgtgcttaaaaaaaaaaaactcttcactcccccctgcacacttttcttaatgc
attaaaattaataactcgtaacagtgacctaatttgctttgagtactgtaactcagggtt
gttgtatgcgtgtgtattttttttctttccagatctgctaaacccttgacatgttactgt
ggtaacaggagcaacttgggaagttcatgaatgaacctcattgtgttctcccaagaaagc
cctctctcccaccattctttgcgatgtttggagctcacccttgcctgttgtgcctatatt
caaagcattggaattgggctgctccaggctgtctccaaatccatgctcaatccccatcat
ctcactgccctactgcggaggtagctgccagtctgcccttaactttcctaaatgctccag
ggctctgcatcaggagggttctccttctctaagaaaatatactttcttggtttaaatctt
ctgcccttccctgccatgtctgtctgggccctcagctaaggaagcctgctgaagatagga
agtaggtcactggattgcttcatcccctgactaccacctcaatccaagccaccagcttct
tccctaattgtctcactgcattctatctgctcccccaaccccctccatatCCAGTGCAGT
TAGAGGGGTC
Primer
(+)gatggcgtctcacaaggagt
(+)gacccctctaactgcactgg


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