Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs1216 ]


Position: chr1:88,646,698-88,648,145 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC100505768 - LOC101927891

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TACCTTTCCTGCACCAGCTAACacgaaagcacacaccacgatgatgttttagtagtgata
aaaatcaaacattttctggagccattatactctaaaatgttaatgaagtttactttttaa
aatgtgatcgatagatgggggaaagtgcccataaattactaaaggcaaaaaacattctat
tagcatgcagtgggtttcgcaatgttcgttggtctgtgttttactggggggaaaattttt
aatctgctgaaagcgtgagttctgtttttgtttttgttgttgttgttgttttaaaatacc
tgtctttgtctttcatggtacaagagggatatttttaacatgactcatttaggaaatgta
attctaatgcagtatagctataggtttcaattaacgttctacctttctgacagtctttac
attacatgttttatgaaatcattaactattgtcatgtttctattatgatactattaggaa
ataaagagacttatgtaaatggagatgtaaaagaaatgtatgacagttactccgagcaac
atctgtgcactatcatacatgctcacactaattttctaaagattgttccattcattatag
agcattgttagttgcagtggcacaacccttatttccatgcatttagggaatgaagcagag
agtgggtaaatgagagcctaatcaataccacttttcattttgcatctaatgtgctgcctt
tccctttcttttcctcatgcacaaatccaaaaaagatcctgacgttacagtcataaaatg
taattcttctgcagaaacacagacaataatgctttctgtattcaggcgtattgcatattc
taatggcatttggctaaattgagtatggatttaacatcaaaggcttcatgaatttttcaa
atgagatattaaagtcaatatttcaagtgaaagatatttcaatttagttgcatacacaac
aataaaaaacttctacaaggtagaggtactagtggctgtagcagtattaattcattcaag
aaattattagtttataagaaaatcaaacacaaggttgtgatatggcaaagactgaataaa
ttagactaaccgatatgcaccagtgtactttatctcttgcaggctgaaacagtacacttg
ccactggcatgttcagggctcctggctgatttttttctaaactctgttgattagcatgaa
gatttgcattgccatttcataaatctccttattttcatttgtacaagtggaagacttagg
atacgtgaaaaaagagccatttttaaccttgcacttaagtggatcttacttcaaggtgtc
aatacctaaagtgggtctccacaatgatgctaaatgttgcctttcgggcaggttagagga
tgctcagtttcggtgtgtgggaaggtgctgtggcttgctgacagccATCCACATCATGGC
AGATAGCT
Primer
(+)TACCTTTCCTGCACCAGCTAAC
(+)AGCTATCTGCCATGATGTGGAT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.