Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs1154 ]


Position: chr2:59,203,217-59,204,548 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LINC01122(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GGGGAGGATTGATTTGAGAAAGaacaatgaggaggagggacataatatctgagttgaagg
agacaaatatccgaatctcccatttaagtatttgttagaaatacatggaactttaaagtg
gcaggctctttcttaaatatttaaatggtcagggggaggaaaaaaaggtaacactgccac
cagcagaagaccaacacacccaagacgacccaaacctttgcctaatcactttttgttaaa
attaatggtaggtttctaattaagcggcgtgcctctgtaaaagcttttaaaagctttttt
tcttctttctctctctcttcctttctcccttcctcccccttttccttcgttccttgcttc
ttttcttccttcctctctctctctttttttcttttttgtcctgttaaataactcctatgg
tctaggtctgtgaaaaggactctgcccctttaattcatcaaatgcagaaaaactggcgta
gccagtatctacaagccacattccaaagggagatgttttcaattcactcattatagaaag
gtcagtcaggttcaagttcaatgtcatggaaaagaagtactctctacaaggagtaccacc
cacacatgaaaaagtggagggagaattagatgaactatgtaacctaattttttgggcaaa
tacaagaaaattagccctgtgtgctatttgaatttaaaactacatattaacaattcagct
gtagaaggtgacagcaaccacaacaaagtaaacacgctctccaaaccactcggccgtaat
gatgttattagtatgcatgttgctgagcccagatgtagcctttagcagcccaagcccttc
cagtgctttttgttctaatggcttcagactctttttcaaaatggggcactcagaacccac
cacgaatagaggacaggatcagaggataattcacactggcaaatgggacatgaccgtcac
gtccgtcttcaccacatcccattgtctgccatgataataaatgatatctgctggaagaca
acaaagcacctgtgaagaatcgtgggttaagtggaactgagcctgtgctgaaactgagtt
ctgagaagttgttcctttaggttgatggcaaaacagttgcctgtagatgggagaatgagg
ccgcactagcgacctctcctgagttctcccctgagtgaatttccccattggaaaaaggat
gtgctggccttcacttacatgtgcttgaatagaaaaattgtatatatacaatcatagcct
acgtgcattcaaaccaactgcccagtcatctgcgagagccttcatctttaTGTTAATTTC
TGCATTGCTGCT
Primer
(+)GGGGAGGATTGATTTGAGAAAG
(+)AGCAGCAATGCAGAAATTAACA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.